Variovorax paradoxus B4: VAPA_1c09440
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Entry
VAPA_1c09440 CDS
T02835
Name
(GenBank) non-hemolytic phospholipase C
KO
K01114
phospholipase C [EC:
3.1.4.3
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00562
Inositol phosphate metabolism
vpd00564
Glycerophospholipid metabolism
vpd00565
Ether lipid metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
VAPA_1c09440
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
VAPA_1c09440
00565 Ether lipid metabolism
VAPA_1c09440
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c09440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vpd02042
]
VAPA_1c09440
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.3 phospholipase C
VAPA_1c09440
Bacterial toxins [BR:
vpd02042
]
Type II toxins: Membrane damaging toxins
Toxins that enzymatically damage the membrane
VAPA_1c09440
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Phosphoesterase
PLipase_C_C
SbsC_spectrin-like
Motif
Other DBs
NCBI-ProteinID:
AGU48064
UniProt:
T1X6W2
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Position
1:1040776..1043127
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AA seq
783 aa
AA seq
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MTTRRKFLQTTTGTGIAAATLATFPPSIRRALAIPAHHETGTIKDVKHVVLLMQENRSFD
SYFGTFKGVRGYGDRFAVPAPNGKTIFHQTYTKTTPPSTYTPYRLDESKGNAQRAGSTPH
GWSDSQAAWDHGRMFKWPDVKNLLSMGYYDTAEVPFQRALAEAFTLCDHYHCGMHTGTIA
NRLFYWSGTNGPNGISPVDGSKVQLAVLNNQFNAGNDIGVSTEGWTWTTYADRLEKAGVK
WKVYQSLIDNFGCNEMMSFRHWRTAIEQMPAARRPVYVPATDITQPVTAAGPFYDPAIDD
ALSPLAKGFGNTMPQGFLETFREDIRNGTLPAVSWIISPSAYSEHPGPSSPAKGGWYVQE
VLDALTSNPEVWSKTVLLINFDENDGFFDHLPSPAAPSRNPDGSLAGATTMAEADVAVEY
HNYTPATSKQPAMDGRPYGPGPRVPMWVVSPWSRGGWVNSQVCDHTSTLMFLEKCFGVAE
PQISKHRRAVCSDLTSAFNFERPNDEPLPALPGRKTKAEADALTAAQEALPKIVPAADAD
LPVQATGVRPSRALPYELHISARSDALNGRVQLLFANSGQAAAVFHVYDKLHLSDRLPRR
YVVEPGKQLDGYWNAMTDDAGLYDLWVLGPNGFHRQFKGDLNRLRAGSAPAPEIRVGYDT
RRGDLYLQMRNDGRRDCRFTVQPNKAYPRPDAYQAGGRDRNGNNGHGNDDKGVYGNNPDG
SWSIRVKGGGETGMRWSLDASGQWYDFVVTCDADPSFYRRLAGRIETGRHSVSDPAMGLQ
DRF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacgccgcaagtttctccagaccaccaccggcaccggcattgccgccgccacg
ctggccacctttccccccagcatccgccgcgcgctggccatccccgcgcatcacgagacc
ggcaccatcaaggacgtcaagcacgtcgtgctgctgatgcaggagaaccgctccttcgac
agctatttcggcaccttcaagggtgtgcgcggctacggcgaccgctttgccgtgccggcg
cccaacggcaagaccatctttcaccagacctacaccaagaccacgccgcccagcacctac
acgccctaccgcctcgacgagagcaagggcaacgcgcagcgcgcaggcagcacgccgcac
ggttggtccgattcgcaggccgcatgggaccacggccgcatgttcaagtggcccgacgtc
aagaacctgctgtcgatgggctactacgacaccgcggaagtgccgttccagcgcgcgctg
gccgaggccttcacgctgtgcgaccactaccactgcggcatgcacaccggcaccattgcg
aaccgcttgttctactggagcggcaccaatggcccgaacggcatcagccccgtcgatggc
agcaaggtgcagcttgcggttctgaacaaccagttcaacgccggcaacgacatcggcgta
tccaccgaaggctggacctggaccacctatgccgaccggctcgagaaggccggcgtgaag
tggaaggtctaccagagcctgatcgacaacttcggctgcaacgagatgatgagctttcgc
cactggcgcacggccatcgagcagatgccggcggcacgccgccccgtgtacgttcccgcg
accgacatcacgcagccggtgaccgccgcgggcccgttctacgacccggccatcgacgat
gcgctcagcccgctcgccaagggcttcggcaacaccatgccgcaaggcttcctcgaaacc
tttcgcgaggacatccgcaacggcaccttgcccgcggtgtcgtggatcatttcgccctcg
gcctacagcgagcatcccggaccatcgagcccggccaagggtggctggtacgtgcaggaa
gtgctggacgcgctgacctccaatcccgaggtctggagcaagaccgtgctgctcatcaac
ttcgacgagaacgacggcttcttcgaccacctgccgtcgcccgcggcgccttcgcgcaac
cccgacggctcgctggccggcgccaccacgatggccgaggccgacgtggccgtcgagtac
cacaactacacgccggccacctccaagcagcccgccatggacggccgcccctacggcccc
ggaccgcgcgtgccgatgtgggtggtctcgccctggagccgcggcggctgggtcaactcg
caggtctgcgaccacacctcgacgctcatgttcctggagaagtgcttcggcgtggccgag
ccgcagatcagcaagcaccgccgcgccgtctgcagcgacctcaccagcgccttcaacttc
gagcgtcccaacgacgagccgctgcccgcgctgcccgggcgcaagaccaaggccgaggcc
gatgcgctgaccgccgcgcaggaggcgctgcccaagatcgtgccggccgccgatgccgac
ctgccggtgcaggccaccggcgtgcgtccctcgcgcgccctcccttacgaactgcacatc
agcgcgcgcagcgacgcgctcaacggccgcgtccagctgctgttcgccaacagcggccag
gccgccgccgtgttccacgtctacgacaagctgcacctgtcggaccgcctgccgcgccgc
tacgtggtggagcccggcaagcagctcgacggctactggaacgccatgaccgacgatgcc
ggcctgtacgacctgtgggtgctcggccccaacggctttcatcgacagttcaagggcgac
ctgaaccggctgcgcgccggaagtgcgcccgcgcccgagatccgcgtgggctatgacacg
cgccgtggcgatctctacctgcagatgcgcaacgatggccggcgcgattgccgcttcacc
gtgcagcccaacaaggcctacccgcgccccgacgcctaccaggccggcggcagggaccgc
aacggcaacaacgggcacggcaatgacgacaagggcgtctacggcaacaaccccgacggc
tcgtggagcatccgcgtcaagggcggcggcgaaaccggcatgcgctggagcctggacgcc
agcggccagtggtacgacttcgtggtgacctgcgatgccgacccttcgttctaccggcgc
cttgccggccggatcgagacgggccggcactcggtgagcgatccggccatggggctgcaa
gaccgcttctga
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