Variovorax paradoxus B4: VAPA_1c09660
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Entry
VAPA_1c09660 CDS
T02835
Name
(GenBank) putative transpeptidase
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00550
Peptidoglycan biosynthesis
vpd01100
Metabolic pathways
vpd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VAPA_1c09660
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VAPA_1c09660
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpd01011
]
VAPA_1c09660
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpd03036
]
VAPA_1c09660
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VAPA_1c09660
Peptidoglycan biosynthesis and degradation proteins [BR:
vpd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VAPA_1c09660
Chromosome and associated proteins [BR:
vpd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VAPA_1c09660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AGU48086
UniProt:
T1X6L9
LinkDB
All DBs
Position
1:1064281..1066029
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AA seq
582 aa
AA seq
DB search
MSRRSVRYTTSPLLASKTPVWRSKFIVAGIAFGFVVLAGRAAYVQVFNNSFFQRQGEVRF
ARTLELPANRGRILDRNGLILASSVVAPSIWAIPEDIERDDPEVRAKLKQVAKLLEMPQK
DFDKKLEDEDKTFVWIKRQVDEPIAKQIAALNLKGLYQRKEYKRQYPEGEAAAHVVGFTN
VEDNGQEGIELSFNKDLAGKAGSRRVIKDRLGRVVEGVGEQVPPVDGKDIQLSVDSKVQF
FAYQKLRDAVTARRAKAGSVVVLDAVTGEVLALANYPSYVPDKRQNLTGEQLRNRALTDT
FEPGSTMKPITVAMALEAGRVKPSTLIETSPGRFQLGGFTISDTHNYGTLTVEGVIQKSS
NVGALKIAQKMTPHEMWDTYTALGYGQKPQIQFPGAVTGRLRPWKTWKPVEQATMAYGYG
LSASLFQMAHSYTAFAHDGAIIPVTILKNTESPVGVRVFSPSNALAVRKMLQMAAGPGGT
GTRAQTIGYSVGGKSGTAHKQVGKGYASNKYRAWFTGMAPIEKPRIIVGVMIDEPSDGQY
FGGVAAAPVFSEVVQQTLRMMNVPPDLAVKPLVVTQGVDESF
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgcagcgtccgctacaccaccagtcccttgctcgcgagcaagacgccggtc
tggcgcagcaagttcatcgtcgccggcatcgccttcggcttcgtggtgctggcgggccgc
gctgcctacgtgcaggtcttcaacaacagcttcttccagcggcagggcgaagtgcgcttt
gcgcgcacgctcgagctgccggccaaccgcggacgcatcctcgaccgcaacggcctcatc
ctggcatccagcgtggtggcgccgagcatctgggccattccggaagacatcgagcgcgac
gaccctgaggtgcgggccaagctcaagcaggtggccaagctgctcgagatgccgcagaag
gacttcgacaagaagctcgaggacgaggacaagaccttcgtctggatcaagcgccaggtg
gacgagcccattgccaagcagattgccgcgctcaacctcaagggcctctaccagcgcaag
gaatacaagcgccagtaccccgagggcgaggccgcggcgcacgtggtgggtttcaccaac
gtcgaggacaacgggcaggaaggcatcgagctctccttcaacaaggacctggccggcaag
gccggatcgcgccgcgtcatcaaggaccgcctgggccgcgtggtcgagggcgtgggcgaa
caggtgccgccggtcgatggcaaggacatccagctcagcgtcgacagcaaggtgcagttc
ttcgcctaccagaagctgcgcgacgccgtgaccgcccgcagggccaaggcgggcagcgtg
gtggtgctcgacgcggtcaccggcgaggtgctggcgctggccaactacccgagctacgtg
cccgacaagcgccagaacctcaccggcgaacagctgcgcaaccgcgcgctcaccgacacc
ttcgagccgggctcgaccatgaagccgatcaccgtggccatggcgctggaggccggccgc
gtgaagccctcgacgctgatcgagacctcgccgggccgcttccagctgggcggcttcacc
atcagcgacacgcacaactacggcacgctcacggtcgagggcgtgatccagaagtcgagc
aacgtgggcgcgctcaagatcgcccaaaagatgaccccgcacgagatgtgggacacctac
accgcgctgggctacggtcagaagccgcagatccagttccccggcgccgtcacggggcgc
ctgcgcccctggaagacctggaagccggtcgagcaggccaccatggcctatggttacggc
ctgtcggcgtcgctgttccagatggcgcattcgtacaccgccttcgcgcatgacggcgcg
atcattcccgtcaccatcctcaagaacacggagtcgcccgtgggcgtgcgggtgttctcg
ccctcgaatgcgctggcggtgcgcaagatgctgcagatggcggcaggcccgggcggcacc
ggcacgcgcgcgcagaccatcggctattcggtcggcggcaagtcgggcaccgcgcacaag
caggttggcaaaggttacgccagcaacaaatatcgcgcctggttcaccggcatggcgccg
atcgagaagccgcggatcatcgtcggcgtgatgatcgacgagccgagcgacggccagtat
ttcggcggcgtggccgccgcgcccgttttcagcgaagtcgtgcagcagaccctgcgcatg
atgaacgttccgcccgacctcgcggtcaaacctctggtggtgacgcagggcgtcgacgag
agtttctga
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