Variovorax paradoxus B4: VAPA_1c09680
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Entry
VAPA_1c09680 CDS
T02835
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00300
Lysine biosynthesis
vpd00550
Peptidoglycan biosynthesis
vpd01100
Metabolic pathways
vpd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VAPA_1c09680 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VAPA_1c09680 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
VAPA_1c09680 (murF)
Enzymes [BR:
vpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
VAPA_1c09680 (murF)
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YiiM_3-alpha
Motif
Other DBs
NCBI-ProteinID:
AGU48088
UniProt:
T1X6B1
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All DBs
Position
1:1067582..1069009
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AA seq
475 aa
AA seq
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MSNSPLMFTLAQAQQWIPGARLVGDGATTIARVHTDTRTLAAGDLFVALKGERFDANEFL
ADAKARGAVAAIAHGGLEAAGLAGLEVSDSLAALGALAAGWRAQFDLPLIAVTGSNGKTT
VTQMIAAVLVAFRGDRALATAGNFNNEIGVPLTLLRLRAKHQHAVVELGMNHPGEIARLA
AIARPTIALVNNAQREHLEFMATVEAVALENGAVFSFVPEGGTAVFPYGDEFTPLWNDMA
RDGATRRSMTFGEHEDADISLLGAEWQQGAWQVRIRTPLGDFDAQLHIAGRHNVVNALAA
TACALAAGIPPEVIARGLTAFVPVKGRSKASEVVLPGGHSLTLVDDSYNANPDSVRAAID
VLAALPGPRLLVLGDMGEVGDRAPEFHAEVGDWARQRGIEAVYALGAETAHSIAAFNGGD
SGRHFPDIEALGAAVLARLPQVGSVLVKGSRFMKMERVVQAIEQSQQQKEAGHDA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattcgccgctgatgttcacactggcccaggcgcagcaatggattcccggcgca
cgcctggtgggcgacggcgcaaccaccattgcccgcgtccatacggacacccgcacgctc
gccgcgggcgacctgttcgtggcgctcaagggcgaacgcttcgatgccaacgagttcctg
gccgatgccaaggcgcgtggcgccgtcgccgccattgcccacggcggcctggaagcggcc
ggcctggccggcctggaggtatccgattcgctggccgcgctcggtgcgcttgccgcaggc
tggcgtgcgcagttcgatctgccgctgatcgccgtgaccggcagcaacggcaagacgaca
gtcacgcagatgatcgcggccgtgctggttgccttcaggggcgaccgcgcactcgcgacg
gccggcaatttcaacaacgagatcggcgttccgctgacgctgctgcgcctgcgcgcgaag
caccagcatgcggtggtcgagctgggcatgaaccacccgggcgagatcgcccggctggcg
gccatcgcacgtccgacgattgcgctggtcaacaacgcccagcgcgaacacctggagttc
atggccaccgtcgaggcggtggcgctcgagaacggcgcggtgttttccttcgtgccggag
gggggcaccgcggtgttcccgtacggcgacgagttcaccccgctgtggaacgacatggca
cgcgacggtgccacgcgccgcagcatgaccttcggcgagcatgaagacgccgacatctcg
ctgcttggcgccgagtggcagcagggcgcatggcaagtccgcatccgcacgccgttgggc
gacttcgatgcgcagctgcacatcgcgggccggcacaacgtcgtcaacgcgctggcggcc
accgcgtgtgcgctcgctgccggcattccgcccgaggtcattgcccgcggcctcacggcc
ttcgtgcctgtgaagggccgctccaaggcgagtgaggtggtcctgcccggcgggcattcg
ctcacgctggtggacgacagctacaacgccaatcccgattccgtgcgcgcggccatcgac
gtgctcgcggccttgcccggcccgcgcctgctggtgctcggcgacatgggcgaggtcggc
gaccgggcacccgaattccatgccgaggtcggcgactgggcgcggcagcgcggcatcgag
gccgtgtacgcgctgggcgccgaaaccgcgcacagcattgccgccttcaatggcggcgac
agcggccgccatttcccggacatcgaggcgctcggcgcagcggtgctggcgcggctgccc
caggtggggagcgtgctcgtcaagggctcgcgcttcatgaagatggagcgcgtggtgcaa
gcgatcgagcaatcacaacaacaaaaggaggccggtcatgacgcatga
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