Variovorax paradoxus B4: VAPA_1c10040
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Entry
VAPA_1c10040 CDS
T02835
Name
(GenBank) MJ0042 family finger-like domain-containing protein
Organism
vpd
Variovorax paradoxus B4
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Gene cluster
GFIT
Motif
Pfam:
DUF3426
zinc_ribbon_5
zinc_ribbon_4
CPxCG_zf
PRCC
Motif
Other DBs
NCBI-ProteinID:
AGU48123
UniProt:
T1X6E3
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Position
1:1106071..1107411
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AA seq
446 aa
AA seq
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MSLVTRCPACATTFKVVRDQLRISDGWVRCGRCSHVFDATLDLHEAPDGPPAASAASPSV
SAPAAPIEPSSSDATEDADFFDDEPEHREPPEAAAPSEAEPVPAPEPEPASTPAPAPAPT
FALPAHGIVADELWTDFEANEPEWRPPASSLPPFPNIDLNLAAPPSPPPPPPPLPALRLK
AREMTASASEEDEKHEPEQDRDQVQMQKALRRARIKSAKIASAKARDERAAAKVSASMVR
EASEPEPGLRPSPLPSVRDDAEDSERLPFSDNSENAGRGIAGFWQRPGARRGLWLLAVLA
VLLLVVQVLRHERDGIVARQPNLRPAFASLCRVAGCELTALRQIGDIVIEGAAFAREKTG
NNDYRLSFTLRNGAAVPLAMPAVELSLLDTQERAVVRRVLMASDYGAPAVLPARSDQAAS
LPLSLSAAEAAALPPIAGYRVEAFYP
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgtcacgcgctgccccgcctgtgccaccaccttcaaggtggtgcgcgaccag
cttcgcatttcggatggctgggtgcgctgcgggcgctgcagccacgtgttcgacgccacg
ctcgacctgcacgaggcgcccgatggcccgccggctgcgagcgctgcgtctccatcggta
tcggcacccgccgcaccgatcgagccgtcctcctccgatgccaccgaggacgcggatttc
ttcgacgacgaacccgagcatcgcgagccgccggaggctgccgcgccttccgaggccgag
ccggtgccagcaccagagcccgagcctgcgtcaacacctgctcccgcacctgcgcccacc
ttcgccttgccggcgcacggcatcgtcgccgacgagctgtggaccgacttcgaggccaac
gagcctgaatggcggccgccggcgagttcgctgccgccgtttccgaacatcgacctgaat
ctggcggccccgccttcgccgccgcccccgccgcctcccttgccggccctgcgcctcaag
gcgcgggaaatgacggcctccgccagcgaagaggacgaaaagcacgagcccgagcaagac
cgcgatcaggtgcagatgcaaaaggcgctgcgccgggcccgcatcaagtcggccaagatc
gcaagtgccaaggcgcgcgacgagcgcgctgccgcaaaggtgtcggcctcgatggtgcgg
gaggcgagcgagcccgagccgggcttgcgtccttcgcccctgccatcggtccgcgacgat
gcggaagattcggagcggcttcctttctccgacaacagcgagaacgcaggccgcggcatt
gcgggtttctggcagcgccctggcgcacggcgcgggctctggctgctggccgtgctcgcc
gtcctgctgctcgtcgtgcaggtcttgcgccacgagcgcgatggcatcgtcgcccgccag
ccgaacctgcgtcccgcgttcgcttcgctgtgccgtgtggctggctgcgaactcacggcg
ctgcggcagatcggcgacatcgtgatcgagggcgcggccttcgcgcgcgagaaaaccggc
aacaacgactaccggctcagcttcacgctgcgcaatggcgcggccgttcctctggccatg
ccggccgtcgagctttcgctgctcgacacgcaggaacgcgccgtggtgcgccgcgtgttg
atggcctcggactatggcgcaccggcggtgcttccggcgcgctccgatcaggccgcgtca
ttgccgctgagcttgtcggcagcggaggcggctgcgctgccgcccatcgccggctaccgc
gtcgaagcgttctatccttag
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