Variovorax paradoxus B4: VAPA_1c10280
Help
Entry
VAPA_1c10280 CDS
T02835
Symbol
ttcA
Name
(GenBank) tRNA 2-thiocytidine biosynthesis protein TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpd03016
]
VAPA_1c10280 (ttcA)
Transfer RNA biogenesis [BR:
vpd03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
VAPA_1c10280 (ttcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
PAPS_reduct
Motif
Other DBs
NCBI-ProteinID:
AGU48147
UniProt:
T1X5H2
LinkDB
All DBs
Position
1:complement(1136522..1137454)
Genome browser
AA seq
310 aa
AA seq
DB search
MNAVWIDEAPVAGATTTHSLKIERETHKLEKRLCREVGRAIVDYNMIEEGDKVMVCVSGG
KDSYAMLDILLKLKARAPIHFDIVAVNLDQKQPGFPEEVLPKYLSELGVAFHIENQDTYS
IVKRVIPEGKTTCGLCSRLRRGILYRVADELGATKVALGHHRDDMLQTFFLNMFFAGKLK
SMPPKLVSDDGKHIVIRPLAYVAEKDLVRWAQHREFPIIPCTLCGSQENLQRKQVGEMLR
EWDKKHPGRVENMFTALQNVVPSHLLDGTRHDFKGLRATGVADEDGDKAFDTPSFDLLSQ
APAALRILQG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtctggatcgacgaggcgcccgtcgccggcgccaccaccacccattccctg
aagatcgaacgcgagacgcacaagctcgagaagcgcctgtgccgcgaggtcggccgcgcc
atcgtcgactacaacatgatcgaagagggcgacaaggtcatggtgtgcgtctcgggcggg
aaggacagctacgccatgctggacatcctgctcaagctcaaggcccgcgcccccattcac
ttcgacatcgtcgcggtcaacctcgaccagaagcagcccggctttcccgaagaggtgctg
cccaagtacctgagcgaactcggcgtggccttccacatcgagaaccaggacacctacagc
atcgtcaagcgcgtgattcccgagggcaagacgacctgcggcctgtgcagccggctgcgc
cgcggcatcctgtaccgggtggcggacgaactgggcgccaccaaggtcgcgctcggccac
caccgcgacgacatgctgcagactttcttcctcaacatgttcttcgcgggcaagctcaag
agcatgccgcccaagctggtgagcgacgacggcaagcacatcgtgatccgcccgctcgcc
tacgtggccgagaaagacctggtgcgctgggcccagcaccgcgaattcccgatcattccc
tgcaccctctgcggcagccaggaaaacctgcagcgcaagcaggtcggcgaaatgctgcgc
gagtgggacaagaagcacccgggccgcgtggagaacatgttcaccgcgctgcagaacgtg
gtgccttcgcacctgctcgacggaacacggcacgacttcaagggtctgagggcgaccggc
gtggccgacgaagacggcgacaaggccttcgacacgccctctttcgacctgctctcccag
gcacctgcagccctgcgcatccttcagggctga
DBGET
integrated database retrieval system
