Variovorax paradoxus B4: VAPA_1c10420
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Entry
VAPA_1c10420 CDS
T02835
Symbol
cca
Name
(GenBank) multifunctional CCA protein
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpd03016
]
VAPA_1c10420 (cca)
Enzymes [BR:
vpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
VAPA_1c10420 (cca)
Transfer RNA biogenesis [BR:
vpd03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
VAPA_1c10420 (cca)
Prokaryotic type
VAPA_1c10420 (cca)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
Motif
Other DBs
NCBI-ProteinID:
AGU48161
UniProt:
T1X6S7
LinkDB
All DBs
Position
1:complement(1149475..1150734)
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AA seq
419 aa
AA seq
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MKTYLVGGALRDRLLGRPVSDHDWLVVGATPEEMAARGYLPVGRDFPVFLHPQTREEYAL
ARTERKSAPGYRGFTVHASPDVTLEQDLARRDLTVNAIALPAEFVDADGRFEADPDRLAD
PFHGRRDLQQKLLRHVTDAFREDPVRILRVARFAARLDDFSVAPETMALMREMVEAGEAD
ALVPERVWQELSRGLMETRPSRMFEVLRACGALAVLLPEVDRLWGVPQPEAHHPEVDSGV
HLMMVIDTSAKLQASLPVRFACLMHDLGKGTTEPGLLPRHIGHEKRSAELLRAVCDRWRV
PVEIRELAEVVAREHGNIHRSGELAAAALVRLLERCDAFRKPARFAEVLLACECDARGRL
GFEDRPYPQRERLLGVLATAAGVPTDAVARAAQQSGAAGPQIGEAIHRARVEAVAASLG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctatctcgtcggcggtgcactgcgtgaccggctgctcgggcgaccggtgtcg
gatcacgactggctggtggtgggcgccacgccggaagaaatggcggcgcgcggctacctg
cccgtggggcgcgacttcccggtgttcctgcatccgcagacccgcgaggaatacgcgctg
gcccgcaccgagcgcaagagcgctcccggctaccgcggcttcaccgtgcacgcctcgccc
gacgtcaccctcgaacaggacctggcgcggcgcgacctcacggtcaacgccatcgcgctg
cccgcggagttcgtggacgccgacggccggttcgaggccgaccccgacaggctcgccgac
ccctttcatggccggcgcgacctgcagcaaaagctgctgcgccacgtcaccgacgccttt
cgcgaagacccggtgcgcatcctgcgggtggcgcgctttgcggcgcgcttggacgatttc
tcggtcgcgcccgaaaccatggccttgatgcgcgagatggtcgaagccggcgaagccgat
gcgctggtgcccgagcgcgtctggcaggagctttcgcgcgggctgatggaaacccgcccg
tcgcgcatgttcgaggtgctgcgcgcctgcggggcgctggcggtgctgctgcccgaggtg
gaccggctctggggcgtgccgcagcccgaggcccatcaccccgaagtggacagcggcgtg
cacctgatgatggtcatcgacaccagcgccaagctgcaggcttcgctgccggtgcgcttc
gcctgcctgatgcacgacctcggcaagggcacgacggagcccgggctgctgccgcgccac
atcggccacgagaagcgcagcgccgagctgctgcgcgcggtgtgcgaccgctggcgcgtg
ccggtcgagatccgcgagctcgccgaggtggtggcgcgcgagcacggcaacatccatcgc
agcggcgaactcgcggccgcggcgctggtgcgcctgctggagcgctgcgacgcgtttcgc
aagccggcgcgctttgccgaggtgctgctggcctgcgagtgcgatgcccgcggacggctc
ggcttcgaggaccggccctatccgcagcgcgagcggctgctcggggtgctcgccacggcg
gctggcgtgcccaccgacgccgtggcgcgcgcggcgcagcaatccggcgccgccgggccg
cagatcggcgaggcgatccaccgcgcacgcgtggaggccgtggcggcatcgctgggctga
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