Variovorax paradoxus B4: VAPA_1c10590
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Entry
VAPA_1c10590 CDS
T02835
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c10590
03036 Chromosome and associated proteins [BR:
vpd03036
]
VAPA_1c10590
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
VAPA_1c10590
Chromosome and associated proteins [BR:
vpd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
VAPA_1c10590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_Crp_2
HTH_IclR
HTH_20
MarR
MarR_2
HVO_A0261_N
HTH_5
Fe_dep_repress
AbiEi_4
NirdL-like_HTH
Rrf2
HTH_Tnp_4
HTH_23
Dimerisation
HTH_28
GARP
HTH_36
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
AGU48178
UniProt:
T1X6I8
LinkDB
All DBs
Position
1:complement(1164172..1164657)
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AA seq
161 aa
AA seq
DB search
MESISLDAIDLRLLDALQRDASQTNQRLAADLGISPPTCLRRVHRLRQEGLIERQVALLS
PDRLAAVLGHGLQAVVEISLDRQDAAALDAFEARVIADDAVQQCWRVSPGPDFVLVVAAR
DMPDYGALTQRLFTADANVRNVKAFFSLKRAKFEPRVPLTP
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggaatccatttctctggatgcaatagaccttcgcctgctcgatgcgctccagcgcgac
gcttcgcagaccaaccagcggctggcggccgacctgggcatctcgccgcccacctgcctg
cgccgcgttcatcgcctgcggcaggaggggttgatcgagcgccaggtcgcgctgctctcg
cccgatcggctcgccgcggtgctgggccacggcttgcaggcggtggtcgagatctcgctg
gaccggcaggacgccgcggccctcgatgccttcgaagcccgcgtgatcgccgacgacgcc
gtgcagcaatgctggcgcgtctcgccggggccggacttcgttctggtggtggcggcgcgc
gacatgccggactacggcgcgctgacccagcgcctgttcacggccgacgccaacgtgcgc
aacgtcaaggccttcttcagcctgaagcgcgcgaagttcgagcccagggtgccgctgacg
ccctga
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