KEGG   Variovorax paradoxus B4: VAPA_1c11270
Entry
VAPA_1c11270      CDS       T02835                                 
Name
(GenBank) general secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VAPA_1c11270
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c11270
Secretion system [BR:vpd02044]
 Type II secretion system
  General secretion pathway protein
   VAPA_1c11270
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: AGU48245
UniProt: T1X7W2
LinkDB
Position
1:complement(1242345..1244663)
AA seq 772 aa
MMKPLTSPGSRLAVVALAAQMLVAATFLQAVPTAFAQTGDAPRRGEPITLNFANADIEAV
ARTMAVVTGRDVVVDPRVKGTMNLVTDRAIAPAAAFNQFASALRLQGFAVVEAEGLYKVV
PEADAKLQTQTVNTATPSAGSVAGNQIVTQIFRLNYESPNSLLPVLRPLIPPNNTINVNP
GNNSLVITDYADNMRRLARIIAALDVPNASDIEVIPLKHSIATDMLPLITRLVDGSGSGA
TPGAAAPGTADASFRTTLLADPRSNALILRAANPARVALVRTLVEKLDRAPAESSNGAAG
NIYVVYLKNADAVRLAATLRAAMAANQLPGTPGAPGATGGSQAQPQASAPQAMQQASLGG
QTGSAAANAPLNNANQPSTGGQIQADPSTNSLIITAPEPQYRQMRAVIDKLDGRRAQVMI
EALIVEVSAKKAANFGVQWQSALGNNAVIGTNSSLASANILALTQALATRDVANVRPSSG
LNLGIAGKIGGQYILGAIANFFNSDGDANVLSTPNLLTLDNEEAKIVIGQNVPFVTGQYA
STSGSVGINPFTTVERKDVGLTLRVRPTINENGTVKMTIFQETSTVDQNTVSNSNGPTTN
KRSIESSVLVEDGGLVMLGGLLSDDYNNTIEKVPVAGDIPVFGNLFKNEIRSRTKSNLMM
FLRPAVMRDGASTEAFAYDRYDEIRGMQQRAQPNTDNVMLRGVDSAPVLPEAPPPRAGNR
DTGSNSNGSDRIQGTQLIPPPRPPADTRTLRPSPLRGALPPTADPTSSRELP
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgatgaagccactgacttcgcccggcagccgcctcgccgtcgttgcactcgcagcgcag
atgctggttgccgccaccttcctgcaggccgtgccgaccgcgttcgcgcagaccggcgat
gcgccgcgccggggcgagcccatcacgctcaacttcgccaacgccgacatcgaggccgtg
gcccgcaccatggcggtggtcaccggccgtgacgtggtggtcgacccgcgcgtcaagggc
acgatgaatctcgtcaccgaccgcgccatcgcgccggccgcggcgttcaaccagttcgct
tccgcgctgcggctgcagggcttcgcggtggtggaggccgaaggactctacaaggtggtg
cccgaagccgacgccaagctccagacccagaccgtcaataccgctacgcccagcgccggc
tcggtggccggcaaccagatcgtcacccagatcttcaggctcaactacgagtcgccgaac
agcctgctgccggtgctgcgcccgctcattccgcccaacaacaccatcaacgtgaacccg
ggcaacaactcgctcgtgatcaccgactacgcggacaacatgcgccggctggcgcgcatc
atcgcggcgctcgacgtgcccaatgcgtcggacatcgaggtgatcccgctcaagcattcg
attgccaccgacatgctgccgctgatcacccggctggtcgatggcagcggctcgggcgca
acaccgggcgccgccgcgccgggcacggccgacgcgtcgttccgcaccaccctgctggcc
gacccgcgcagcaatgcgctgatcctgcgcgcggccaatccggcgcgtgtggcgctggtg
cgcacgctggtcgaaaagctcgaccgcgcgcccgccgaaagcagcaacggcgcggccggc
aacatctacgtggtctatctgaagaacgccgatgcggtgcggctggcggccacgctgcgc
gccgccatggcggcgaaccagctgcccggcacgccgggcgcgccaggcgccacgggtggc
agccaggcgcagccgcaggccagcgcaccgcaggccatgcagcaagccagcctcggcggg
caaaccggctcggcggccgccaacgcaccgctgaacaatgccaaccagccgtcgaccggc
ggacagatccaggccgacccgtcgaccaactcgctgatcatcacggcgcccgagccgcag
taccgccagatgcgcgcggtgatcgacaagctcgacggccggcgcgcacaggtcatgatc
gaagcgctgatcgtcgaggtcagcgccaagaaggccgccaacttcggcgtccagtggcag
agcgcgctgggcaacaacgcggtcatcggcaccaattcaagcctggccagcgcgaacatc
ctggcgctgacccaggccctggccacgcgcgacgtcgccaacgttcggccgtcttccggc
ctgaacctgggcattgccggcaagatcggcggccagtacatcctgggcgccattgcgaac
ttcttcaacagcgacggcgacgccaacgtgctctcgacgcccaacctgctgacgctggac
aacgaggaagccaagatcgtcatcggccagaacgtgcccttcgtcacgggccagtacgcc
agcacctcgggctcggtgggcatcaacccattcaccacggtggagcgcaaggacgtgggc
ctcacgctgcgcgtgcgcccgaccatcaacgagaacggcaccgtgaagatgaccatcttc
caggaaacctcgaccgtcgaccagaacacggtcagcaattccaacggcccgaccaccaac
aagcgctcgatcgagtccagcgtgctggtggaagacggcggcctggtcatgctcggcgga
ctgctgtcggacgactacaacaacaccatcgagaaggtgcccgtggccggcgacattccg
gtgttcggcaacctgttcaagaacgagatccgctcgcgcaccaagagcaacctgatgatg
ttcctgcgcccggcggtcatgcgcgacggcgcctcgaccgaagcctttgcctacgaccgc
tacgacgagatccgcggcatgcagcagcgcgcgcagccgaacaccgacaacgtcatgctg
cgcggggtggattccgcacccgtgctaccggaagccccgccgccccgcgcgggcaatcgc
gataccggcagcaacagcaacggcagcgaccgcatccagggcacgcagctcatcccgccg
ccgcgcccacccgccgacacgcgtaccttgcgcccgagcccgctgcgcggcgccctgccg
cccacggccgacccgaccagctcgcgcgaactgccctga

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