Variovorax paradoxus B4: VAPA_1c11720
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Entry
VAPA_1c11720 CDS
T02835
Name
(GenBank) putative transcriptional regulator, AraC family
Organism
vpd
Variovorax paradoxus B4
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGU48288
UniProt:
T1X6T5
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Position
1:1289830..1290768
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AA seq
312 aa
AA seq
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MTTSTRKRSIPRQRQPELERDIARSPSLGYEAPETGLVRCLAHGFPSPLVRWHFHEDYEL
HLITETSGKAFIGDWIGPFQPGHLVLCGPRLPHNWISLDVPEGGAAGRDRVIQFRHEPIE
RAAAEIPELRDVMQLFERARHGIEFFGMSQQAQTHWDNIKAARGVRRLGLFLEFMADLAQ
CTDYRLLSSVQMQGAHGIEGDAQVDQINDIVNRITSNMAEPISMSDVAAELGMSESRFSR
FFRRSTGNSFTDFVNRVRINSACHLLMQTDHYVTDICYQVGFNNVANFNRRFLEIKGMTP
SEFRRQADTRFG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtccacacgcaaacgctcgattccccgtcagcgccaacccgagctggagcgc
gacattgcgcgctccccgtcgctgggctacgaggcccccgaaaccggcctggtgcgctgc
ctggcgcacggcttcccgagcccgctggtgcgatggcacttccatgaagactacgagctg
cacctgatcaccgagacctcgggcaaggctttcatcggcgactggatcgggccgttccag
cccgggcacctcgtgctctgcgggccgcggctgccgcacaactggatttcgctcgacgtg
cccgaaggcggcgccgcggggcgcgaccgggtgatccagttccgccacgagcccatcgag
cgcgccgcggccgagattccggagctgcgcgacgtgatgcagctgttcgaacgggcgcgg
cacggcatcgagttcttcggcatgtcgcagcaggcacagacgcactgggacaacatcaag
gccgcgcgcggcgtgcgccggctcgggctgttcctcgagttcatggccgacctcgcgcaa
tgcaccgactaccggctgctctcgagcgtgcagatgcagggtgcgcacggcatcgaaggc
gatgcgcaggtcgaccagatcaacgacatcgtcaaccgcatcaccagcaacatggcggag
ccgatctccatgtcggacgtggcagccgagctcggcatgagcgaaagccgcttcagccgc
ttcttccggcgctccaccggcaacagcttcaccgacttcgtcaaccgcgtgcgcatcaac
agcgcctgccacctgctgatgcagaccgaccactacgtgaccgacatctgctaccaggtc
ggcttcaacaacgtggccaatttcaaccggcgctttctcgagatcaagggaatgacgccg
agcgaattcaggcgccaggccgacacccgtttcggctga
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