Variovorax paradoxus B4: VAPA_1c11800
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Entry
VAPA_1c11800 CDS
T02835
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c11800
Transporters [BR:
vpd02000
]
Other transporters
Pores ion channels [TC:
1
]
VAPA_1c11800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AGU48296
UniProt:
T1X743
LinkDB
All DBs
Position
1:1299944..1302103
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AA seq
719 aa
AA seq
DB search
MKPASLAVATTATATVVRLLLLGAPLAAQAQQQEVQSQPDRGSLPQVTVSTPRGEVAPFN
VPGSVDRVDGAEMRDSRLQVNLSEGLGGVPGLQVQNRMNYAQDLQLSIRGFGARSTFGVR
GVRLYVDGIPATLPDGQGQTSNIDIGSLDRIEILRGPFSALYGNSSGGVLQAFTASGEGA
PRLAYSAAGGSFGTWRQSLQASGSQGAVDYLLNASRFQTDGWREHSAARRDIANGKLGIA
LDNGDKLTLVLNSVRVSAQDPLGLTADQYALAPRSAPLATQFDTRKTVEQTQAGLLYERR
VSAAQSLRLMVYGGERKTVQYQSIPPSAQQNPLHAGGVIDLKRQYGGVDLRWTAALQLAD
RPLELVAGLGYDSLREQRRGYENYLGRVASPVLGVQGRLRRSERNEVWNLDPYAQATWRL
AEQWTLEAGVRRSSVHFDSQDRYIVGANRDDSGSARYSKTLPVASLRYQATPDLALYGSI
GRGFETPTLNELSYRAGGASGLNFALRPSVNDSVELGAKARLGAGLLTAALFQTRTRDEI
VTDTNSGGRATFQNAGRTRRNGFELAWQHETASHWRTQLAYTWLDARYRDAFCSPSPCAA
SNTVAAGNRIPGIARQSLFASLGWVPPEGWRAGVEMRALGRMQANDVNTASAPGYAVAAL
YAGYLKKWERWEFNAFARVDNLFDRRYVGSLIVNEGNARYYEPAPGRNWTVGLSGAYRF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgcatctctcgccgtcgccacaaccgcaaccgccactgttgttcgcctgctc
ctgctgggagccccgcttgccgcccaggcgcagcagcaggaagtgcagtcgcagcccgac
cgcggcagtcttccccaagtcactgtctccacaccgcgcggcgaggtcgctccgttcaac
gtgcccggctcggtcgatcgcgtcgatggcgccgagatgcgcgacagccggctgcaggtc
aatctttccgaaggcctgggcggcgttccgggcctgcaggtgcagaaccgcatgaactac
gcgcaagacctgcagctgtcgattcgcggctttggcgcgcgttccacctttggcgtgcgc
ggcgtgcggctgtatgtcgacggcattcccgccacgctgccagacggccagggccagacc
tccaacatcgacatcggctcgctcgatcgcatcgagatattgcgcggtccgttctccgcg
ctgtacggcaactcctccggcggcgtgctgcaggctttcaccgcatcgggcgagggggcg
ccgcggcttgcgtactcggcggccggagggagcttcggcacctggcgccagtcgctccag
gccagcgggtcgcagggcgcggtcgactacctgctgaatgccagccgcttccagaccgac
ggctggcgcgagcacagtgcggcacggcgcgacattgcgaacggcaagctcggcatcgcg
ctggacaacggcgacaagctcacgctggtgctcaacagcgtgcgcgtcagcgcgcaggat
ccgctgggcctcacggccgaccagtacgcgctggcgccgcgcagcgcgccgctcgccacg
cagttcgacacccgcaagacggtggagcagacccaggcgggcctgctgtacgagcgccga
gtcagcgccgcgcagtcgctgcggctcatggtctatggcggcgagcgcaagaccgtgcag
taccagtcgatcccgccttcggcgcagcagaacccgctgcatgcgggcggcgtgatcgac
ctcaagcgccagtacggcggggtcgatctgcgctggaccgccgcgctgcaactggccgac
cggccgctcgaactggtggcgggcctgggctacgacagcctgcgcgaacagcgccgcggc
tacgagaactacctcggccgcgtggcctcgcccgtgctgggcgtgcaaggccgcctgcgg
cgcagcgagcgcaacgaggtctggaacctcgatccctacgcccaggccacctggcgcctc
gcggagcaatggacgctcgaggccggcgtgcgccgaagcagcgtgcacttcgattcgcag
gaccgctacatcgtgggcgccaaccgcgatgacagcggcagcgcgcgctacagcaagacg
ctgcccgtggcttcgctgcgctaccaggcgacgcccgatctcgcactgtatggctcgatc
ggccgtggcttcgagacacccacgctcaacgagctttcctaccgcgcgggcggtgccagc
gggctcaacttcgcgctgcggccctccgtcaacgacagcgtcgagctgggcgcgaaggcg
cggctgggcgcaggcttgctgacggcggcgctgttccagacccgcacgcgcgacgagatc
gtgaccgacaccaacagcggcggccgcgccactttccagaacgcgggccgcacgcggcgc
aacggcttcgaactggcctggcagcacgagacggccagccactggcgcacccagcttgcc
tacacctggcttgacgcgcgctaccgcgatgccttctgctcgccgtcgccctgcgcggca
tccaacacggtggcggcgggcaaccgcattccgggcattgcgcggcagtcgctctttgcg
tcgctgggctgggtgccgcccgaaggctggcgggccggcgtcgagatgcgtgcgctcgga
cgcatgcaggccaacgacgtcaacaccgccagcgcgccgggctatgccgtcgcggcgctg
tacgccggctacctgaagaaatgggaacgctgggagttcaacgcctttgcgcgcgtcgac
aacctgttcgaccgccgctacgtgggctcgctgatcgtcaacgagggcaacgcgcgctac
tacgagcccgcgccgggccgcaactggacggtgggcctgagcggcgcctaccgcttctga
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