Variovorax paradoxus B4: VAPA_1c12030
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Entry
VAPA_1c12030 CDS
T02835
Symbol
pilQ
Name
(GenBank) fimbrial assembly protein PilQ
KO
K02666
type IV pilus assembly protein PilQ
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpd02044
]
VAPA_1c12030 (pilQ)
02035 Bacterial motility proteins [BR:
vpd02035
]
VAPA_1c12030 (pilQ)
Secretion system [BR:
vpd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
VAPA_1c12030 (pilQ)
Bacterial motility proteins [BR:
vpd02035
]
Pilus system
Pilus assembly proteins
VAPA_1c12030 (pilQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
AGU48319
LinkDB
All DBs
Position
1:1325095..1327233
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AA seq
712 aa
AA seq
DB search
MNQKKSTMAQRLRAAGLGLLALGAFAMAHAQNAIEAVTSSTQSGAEVIRIDLTQPLAALP
TGFAVQTPARIALDFPGVTNAIGRSAIEVNQGNLRSVNVVQAGERSRVVLNLKQATAYKT
EIQGKSLLVILEPVAGTALASSTPTVFAENRNRDTLPLRDVDFRLGADNTGRVIVDLPNN
QVGVDVRQQGKNLVVEFTKSTLPEGLRRRLDVADFNTPVQLITSQQSGDRVRMTIEAKGD
WEHSAYQSENQFVVELRARKVDPAKLTQGVGYNGEKLSLNFQNIEIRSLLQVIADFTNFN
IVTSDSVTGALTLRLKDVPWDQALDIIMQAKNLGMRKNGSVLWIAPKDEINAKEKLEFEA
KAAIENLEPVRTQSFQLNYTKAIAIAQGLTGTGASAGGGGGSGTTTRILSPRGSVIAESR
TNQLFVSDIPSRLAQVADLIQKLDIPVRQVLIEARIVEASDTFGKSLGVRLGGGIAGERI
ASSSGNRAFGTVGVMPVTGTGTTGPTTTWTNSNFINLPAGDAGGTGNAAGTFAISLFNSS
FSRMLNLEISALEADGKGKLVSSPRVITADQTKALIEQGEEIPYQQATSSGATSISFRKA
VLKLEVTPQITPEGNIILTLDVSKDARGVNTSAGPAINTKHVQTEVLVENGGTVVIGGIF
ELTETNDESRVPVLGEVPYLGALFRKRERVANKTEMLVFITPKMITDRNAAR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaaaaaatcaacgatggcacagcggctgcgagctgcagggctgggtctgctg
gcacttggcgctttcgctatggcccatgcgcaaaacgccatcgaggcggtgaccagttcg
acgcagtccggcgcggaggtgatccgcatcgacctcacccagccgctcgcggccttgccg
accggctttgccgtgcagacgccggcgcgcatcgcgctcgattttccgggcgtgaccaat
gccatcgggcgctcggccattgaagtgaaccagggcaacctgcgttccgtcaatgtggtc
caggccggcgagcgcagccgggtggtgctgaacctcaagcaggcaacggcgtacaagacc
gagatccagggcaaatcgctgctggtgatcctcgagcccgtggccggcacggcgctggcg
tcgtccacgcccacggtctttgccgagaaccgcaaccgcgacaccctgccgctgcgcgac
gtcgacttccgcctgggcgcggacaacacgggccgcgtgatcgtcgacctgccgaacaac
caggtgggcgtcgatgtccgccagcagggcaagaacctcgtggtcgagttcaccaagtcg
accctgcccgaggggctgcgccgccgcctcgacgtggccgacttcaacacgccggtccag
ctgatcacctcgcaacagtcgggcgaccgcgtgcgcatgacgatcgaggccaagggcgac
tgggagcacagcgcctatcagagcgaaaaccagttcgtggtggagcttcgcgcccgcaag
gtggacccggccaagctgacgcagggcgtgggctacaacggcgagaagctctcgctgaac
ttccagaacatcgagatccgctcgctgctgcaggtgattgccgacttcacgaacttcaac
atcgtgacctccgactcggtcaccggggcactgacgctgcggctgaaggacgtgccgtgg
gaccaggccctcgacatcatcatgcaggcgaagaacctgggcatgcgcaagaacggcagc
gtgctgtggattgcgcccaaggatgaaatcaacgccaaggaaaagctcgaattcgaggcc
aaggccgcgatcgagaacctggagccggtgcgcacccagtcgttccagctcaactacacc
aaggcgatcgccatcgcgcaaggcttgacgggcactggcgcctcggccggcggtggtggc
ggctccggcaccaccacgcgcatcctgagcccgcgcggcagcgtgatcgcggagtcgcgc
accaaccagctgttcgtgtcggacattccctcgcgcctggcgcaggtggccgacctgatc
cagaagctcgacatcccggttcgccaggtgctgatcgaagcccgcatcgtggaagcgtcc
gacaccttcggcaagtcgctcggcgtgcggctgggcggcggcattgccggcgagcgcatt
gcctcgtcgtccggcaaccgggcgttcggcaccgtgggcgtgatgcctgtcacgggcacc
ggcaccaccggcccgaccaccacctggaccaactccaacttcatcaacctgcccgcaggc
gacgccggcggcacgggcaatgcggcaggcaccttcgcgatctcgctgttcaactcgagc
ttctcgcgcatgctgaacctcgaaatctccgcactcgaggccgacggcaagggcaagctg
gtgtccagcccccgcgtcatcaccgccgaccagacgaaggcgctgatcgagcagggcgag
gaaattccctaccagcaggccacgtccagcggcgccacctccatttcgttccgcaaggcg
gtgctcaagctcgaggtcacgccgcagatcacccccgaaggcaacatcatcctcacgctc
gacgtgagcaaggatgcccgcggcgtcaacacctcggcgggcccggccatcaacaccaag
cacgttcagaccgaggtgctggtcgagaacggcggcacggtcgtcatcggtggtatcttc
gaactcaccgaaaccaatgacgaatcgcgcgtgccggtgctgggtgaagtgccctacctg
ggtgcactgttccgcaagcgcgaacgcgttgccaacaagaccgaaatgctcgtctttatc
actccgaagatgattaccgaccgcaacgccgcgcgctga
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