Variovorax paradoxus B4: VAPA_1c12960
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Entry
VAPA_1c12960 CDS
T02835
Name
(GenBank) ABC transporter, branched-chain amino acid-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c12960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c12960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c12960
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c12960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peripla_BP_3
Epimerase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AGU48411
UniProt:
T1X7F3
LinkDB
All DBs
Position
1:complement(1417852..1419000)
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AA seq
382 aa
AA seq
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MKFFFKPLLIAALCATAAAAWADVNVGVTLSATGPAASLGIPEKNTISLMPKTIGGQKIN
YIVLDDASDTTAAVANTRKLIAENKVDIVLGSTTTPNSLAMIDVVSEAKTPMISIAASAR
IVEPMDAKKQWVFKTPQNDIMMSLAIAEHMAASGVKTVAFIGFSDAYGEGWSQEFAKAAE
LKKLKIVANERYARTDTSVTGQALKIMAAKADAVLVAGSGTPAALPQKTLKERGYTGKMY
QTHGVANADFLRVGGKDVEGTFLPAGPVLVAEQLPASHPVKKSALAYVTAYEAVNGKNSV
STFGAHAWDAGLLMTSAVPVALKKAQPGTPEFRAALRDALEQVKEVSGAHGVFNMTANDH
LGLDQRARVMVKIENGAWKYQP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcttcttcaagcccctgctgatcgccgcgctgtgcgccaccgccgccgcggcc
tgggccgacgtcaatgtcggcgtgacgctgtcggccaccgggccggccgcctcgctcggc
attcccgagaagaacaccatctccctgatgcccaagaccatcggcggccagaagatcaac
tacatcgttctggacgacgcttccgacaccacggcggccgtggccaacacgcgcaagctc
atcgccgagaacaaggtcgacatcgtgctgggctcgaccaccacgcccaactcgctcgcg
atgatcgacgtggtgagcgaagccaagacgccgatgatctccattgccgcatcggcccgc
atcgtcgagcccatggacgccaagaagcagtgggtcttcaagacgccgcagaacgacatc
atgatgtcgctcgcgattgccgagcacatggccgccagcggtgtgaagacggtggccttc
atcggcttctccgatgcctacggcgaaggctggtcgcaggaattcgccaaggcggcggag
ctgaagaagctcaagatcgtggccaacgagcgctatgcgcgcaccgacacctcggtgacc
gggcaggccctgaagatcatggccgccaaggccgacgcggtgctggtcgcgggctcgggc
acgccggccgcgctgccgcagaagacgctcaaggagcgcggctacaccggcaagatgtac
cagacgcacggcgtggccaatgccgacttcctgcgcgttggcggcaaggacgtggaaggc
accttcctgcccgcgggccccgtgctggtggccgagcagctgcccgcgagccatccggtg
aagaagtcggccttggcctatgtcaccgcctacgaggccgtgaacggcaagaactcggtg
tcgaccttcggcgcgcatgcctgggacgcgggcctgctgatgacctcggccgtgccggtg
gcgctcaagaaggcgcagcccggtacgcccgaattccgcgccgcactgcgcgacgcgctc
gagcaagtcaaggaagtgtcgggcgcgcacggcgtattcaacatgaccgccaacgatcat
ctgggtctcgatcagcgtgcccgggtcatggtcaagatcgagaacggcgcctggaaatac
cagccctga
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