Variovorax paradoxus B4: VAPA_1c13110
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Entry
VAPA_1c13110 CDS
T02835
Name
(GenBank) putative deoxyribonuclease, TatD family
KO
K03424
TatD DNase family protein [EC:3.1.21.-]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VAPA_1c13110
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GFIT
Motif
Pfam:
TatD_DNase
Motif
Other DBs
NCBI-ProteinID:
AGU48426
UniProt:
T1X7G8
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All DBs
Position
1:1431123..1431983
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AA seq
286 aa
AA seq
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MAVFVDTHCHLDAPEFGAEMPLIRARAAERGVALCVIPAVAVFNFATVRELAQVQGDAYA
LGIHPLCTGNAQDADLEALDAELAARRSDPRLVAVGEIGLDYFVEGLDSDKQQHFFHTQL
QLARKYDLPVLIHVRRSVDKVLKHLRQTAAGRPWQGIAHAFNGSEQQATACIDIGLKLGF
GGTVTFDRALQLRRLAATLPLDSMVMETDAPDIQPHWLYRTQAQRAAGEPQGRNEPGELP
RIAEVVARLRGMEVDELARATTRNALKALPGLESLLSLSEGRPHPA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatttgtcgatacccactgccacctcgatgcgcccgaattcggtgcggaaatg
ccgctcatccgtgcacgggccgccgaacggggcgtcgcgctgtgcgtcattcctgccgtg
gcggtcttcaattttgcgaccgtgcgcgagctggcgcaggtgcagggcgacgcctatgcg
ctcggaatccacccgctgtgcaccggcaatgcgcaggatgccgacctggaggcgctcgat
gccgagcttgccgcacgccgcagcgacccacggctggtcgcggtcggcgaaatcggtctc
gactacttcgtggaagggttggacagcgacaagcagcagcacttttttcacactcagttg
caactcgcgcgcaaatacgatctgccggtgctcatccacgtgcgccgctcggtcgacaag
gtgctcaagcacctgcggcagaccgcggccggccggccgtggcagggcatcgcccatgcg
ttcaacggcagcgagcagcaggccacggcctgcatcgacatcgggctgaagctgggcttc
ggcggcaccgtcaccttcgatcgcgcattgcagctgcggcggctggcggccacgcttccg
ctcgattcgatggtgatggaaaccgatgcgcccgacatccagccgcattggctctaccgc
acccaggcgcagcgcgcggccggcgaaccgcagggccgcaacgaaccgggcgaactgccg
cgcatcgccgaagtggtggcccggctgcgcggaatggaagtcgatgaactggcccgggcc
accacccgcaacgcgctgaaagccctgccggggctcgaaagtcttctttcgttgtcggaa
ggccggccgcaccccgcgtag
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