Variovorax paradoxus B4: VAPA_1c13810
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Entry
VAPA_1c13810 CDS
T02835
Name
(GenBank) putative mandelate racemase/muconate lactonizing enzyme
KO
K12661
L-rhamnonate dehydratase [EC:
4.2.1.90
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00051
Fructose and mannose metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
VAPA_1c13810
Enzymes [BR:
vpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.90 L-rhamnonate dehydratase
VAPA_1c13810
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Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-ProteinID:
AGU48494
UniProt:
T1X831
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All DBs
Position
1:1502238..1503392
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AA seq
384 aa
AA seq
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MKITRVSATPLNIPVTIDVLGLNKQTSLSLCLTEIETDTGLVGHGMTAITEEEIIAAAVR
EVAGPALIGEDPMATERLWEKLYWLLSPRGQTGYASHTIAALDIALWDLKARALGQPLWR
LLGGARSKVPVYATFGFGFFERDQLAAAARLWVSQGFRRLKMTVGGHALARRDEPRPIDE
VIAEDVRRVAAVREAVGPDVKLYVDANCGLDLFHATELARRIEPYGISFFEEPLTQNDVR
QMAQLRARTTIPLACGQNEGLAFRFRDLLVNQAADVLQPNVTISGGYTQCLKIAGMAQAF
NVPIDNGGAWPFHNMHLHAGVSNGGMAEYHYVAVQMLKQIFDDLPVPQDGWLQLPETPGL
GFAPNAERVRELAKLPTSRGKGKA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatcacccgcgtcagcgccacgccgctgaacattcccgtcaccatcgatgtgctg
gggctgaacaagcagacctcgctctcgctctgcctgaccgagatcgagaccgacaccggc
ctcgtcggccatggcatgacggccatcacggaagaagaaatcatcgccgccgccgtgcgc
gaggtggccggccctgcattgatcggcgaagacccgatggccaccgagcgcctgtgggag
aagctctactggctgctctcgccgcgcggccagaccggctatgcgagccacaccatcgcc
gcgctcgacatcgcgctgtgggacctgaaggccagggcgctcggccagccgctgtggcgc
ctgctgggcggtgcccgttccaaggtgccggtctatgcgaccttcggcttcggcttcttc
gagcgcgaccagctcgccgccgccgccaggctttgggtctcgcagggcttccggcgcctg
aagatgaccgtcggcggccatgcgctcgcgcggcgcgacgagccgcggcccatcgacgag
gtcattgccgaggacgtgcgccgcgtggcggccgtgcgcgaggcggtcggccccgacgtg
aagctgtatgtcgacgccaactgcggcctcgacctgttccacgcgaccgagctcgcacgc
cgcatcgagccctacggcatcagcttcttcgaggagccgctcacgcagaacgacgtgcgg
cagatggcccagctgcgcgcgcgcaccaccattccgctggcctgcgggcagaacgaaggg
ctggccttccgcttccgcgacctgctggtgaaccaggcggccgacgtgctgcagcccaac
gtgaccatctcgggcggctacacgcagtgcctcaagatcgcgggcatggcgcaggccttc
aacgtgccgatcgacaacggcggcgcctggcccttccacaacatgcacctgcatgcgggc
gtgtcgaacggcggcatggccgaataccactacgtggccgtgcagatgctcaagcagatc
ttcgacgacctgccggtgccgcaggacggttggctgcagctgccggagacaccgggcctg
ggcttcgcgcccaatgcggagcgcgtgcgcgagcttgcgaagctccccacttcgcgcggc
aagggcaaagcctag
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