Variovorax paradoxus B4: VAPA_1c13860
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Entry
VAPA_1c13860 CDS
T02835
Name
(GenBank) putative citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00020
Citrate cycle (TCA cycle)
vpd00630
Glyoxylate and dicarboxylate metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01210
2-Oxocarboxylic acid metabolism
vpd01230
Biosynthesis of amino acids
Module
vpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpd_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
vpd_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VAPA_1c13860
00630 Glyoxylate and dicarboxylate metabolism
VAPA_1c13860
Enzymes [BR:
vpd01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
VAPA_1c13860
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
MOZART1
Motif
Other DBs
NCBI-ProteinID:
AGU48499
UniProt:
T1X837
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Position
1:complement(1507750..1508538)
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AA seq
262 aa
AA seq
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MTTTKIKKSLHTELGHSTPDRITVRGRDLPSEILGHLNLGDMAFLELTGRIPTPQESVTF
NAIVVTLVEHGVTPSALAARLTYAGAPEALQAAVAAGLCGLGTVFVGSTEGAAKMLYEAI
PFGEKPARPLADMAKDIVADHRARKQIVPGLGHPLHKPIDPRTPRLFQIAEENGLSGHYV
ALMQAVQQEAERASGKSLPINATGAIGAIAAEFGFPWKIIRGLGVMARAIGLVGHLLEEI
DDPMAIEIWQRVEKEAGGPRQD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacaaagatcaagaaatccctgcacaccgaactcggccacagcacacccgac
cggatcaccgtgcgcgggcgcgacctgccctccgagatcctgggccacctgaacctgggc
gacatggccttcctggagctcacgggccgcatcccgacgccgcaggagtcggtcaccttc
aatgccatcgtcgtcacgctggtcgagcatggcgtcacgcccagcgcgctggccgcgcgc
ctcacctatgcgggcgcgcccgaggccttgcaggccgcggtggccgcgggcctgtgcgga
ctgggcacggtgttcgtgggcagtaccgaaggcgcagcgaagatgctctacgaggccatt
cccttcggcgagaagccggcgcggccgctggccgacatggcgaaggacatcgtggccgac
caccgcgcgcgcaagcagatcgtgccgggcctcgggcatccgctgcacaagccgatcgat
ccgcgcacgccgcgcctgttccagatcgccgaggagaacggcctctcgggccactacgtg
gcgctgatgcaggcggtgcagcaggaggccgagcgcgcgtcgggcaagtcgctgcccatc
aatgcgacgggcgccatcggagcgattgcggccgagttcggctttccgtggaagatcatc
cgcggcctcggcgtgatggcgcgcgccatcgggctcgtgggccacctcctcgaggaaatc
gacgacccgatggccatcgagatctggcaacgggtggaaaaggaagccggcggcccgcgc
caggattga
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