Variovorax paradoxus B4: VAPA_1c14220
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Entry
VAPA_1c14220 CDS
T02835
Name
(GenBank) putative peptide ABC transporter, permease protein
KO
K02033
peptide/nickel transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c14220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c14220
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VAPA_1c14220
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
AGU48535
UniProt:
T1X8P7
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All DBs
Position
1:1546800..1547741
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AA seq
313 aa
AA seq
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MLIFLARRILSTVPVLVIVALIVFLMLRLAPGDPAAAIVGDSGTSENIAKVRDQLGLNES
LPTQFVRWSGQLLQGNLGESYFMKKTVVELIGQRIEPTVSLAAVTLVVTILIAVPLGVVA
AWRHGGWLDRMLMGFSVMGFSIPAFVIGYVLIWIFALHLQLLPVQGYSRLGQGPWLWIRH
LILPSITLSIIYVALIARVTRAAVAEAMTEDYIRTARAKGISEKRVLMRHALANAAIPIV
TVIGIGIALLIGGVVVTETVFAIPGLGQLTVDAVLSRDFPLIQGITLFFSVVYVLINLLI
DLSYLVFDPRIRY
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctttcttgcgcgccgcatcctgtcgaccgtgccggtgctcgtcatcgtcgcg
ctgatcgtgttcctcatgctccggctggcgcccggcgatccggccgccgccatcgtgggc
gacagcggcaccagcgagaacatcgccaaggtgagggaccagctggggctgaacgaatcg
ctgcccacgcagttcgtgcgctggagcgggcagttgctgcagggcaacctgggcgagtcc
tacttcatgaagaagacggtggtggaactcatcgggcagcgcatcgagccgacggtgtcg
ctcgccgcagtgacgctggtggtcaccatcctcatcgcagtgccgctgggtgtggtggcc
gcctggcgccatggcggctggctcgaccgcatgctcatgggcttctcggtcatgggtttt
tcgataccggccttcgtgatcggctacgtgctcatctggatcttcgcgctgcacctgcag
ctgctgccggtgcagggctactcgcggctcggccaggggccgtggctctggatcaggcac
ctgatcctgccgtccatcacgctgtcgatcatctacgtggcgctgattgcacgcgtcacg
cgcgcggccgtggccgaggccatgaccgaagactacatccgcaccgcgcgcgccaagggc
atttcggaaaaacgggtgctgatgcggcatgcgctggccaatgcggcgattccgatcgtc
acggtgatcggcatcggaattgcgctcctgatcggtggcgtggtcgtcaccgaaaccgtg
ttcgccattccgggcctcgggcagctcacggtcgatgcggtgctgtcgcgcgactttccg
ctgatacagggcatcacgctgttcttttccgtcgtctacgtgctcatcaacctgctgatc
gacctgagctacctggtgttcgatccccgcatccgctattga
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