KEGG   Variovorax paradoxus B4: VAPA_1c14770
Entry
VAPA_1c14770      CDS       T02835                                 
Name
(GenBank) putative methyltransferase
  KO
K07056  16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vpd03009]
    VAPA_1c14770
Enzymes [BR:vpd01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.198  16S rRNA (cytidine1402-2'-O)-methyltransferase
     VAPA_1c14770
Ribosome biogenesis [BR:vpd03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    VAPA_1c14770
SSDB
Motif
Pfam: TP_methylase
Other DBs
NCBI-ProteinID: AGU48589
UniProt: T1X8G2
LinkDB
Position
1:complement(1615362..1616126)
AA seq 254 aa
MTYGKLYLVPAPLDFGCDTQAPLQDALPLGTLQAAAGITHWICENAKSARAYLKRIDAIV
PLAAPLQAQDIRELPREVHKKGDHAGQFDARPLLAAALEGRDIGLLSEAGMPAVADPGSS
VARAAHDLGIAVVPLTGPVSLLLALAASGLNGQNFAFVGYLPQDAGERQVRIRELEALAL
KTGQTQLFIETPYRNAALLQALVQTLQHNTRLAVARGLTLASAHVRSETVKSWRAKAPQG
TSDERLPAVFAIGR
NT seq 765 nt   +upstreamnt  +downstreamnt
gtgacctacggcaagctctacctcgttcccgcgccactcgacttcggctgcgacacccag
gcgccgctgcaggatgccctgcctctgggcacgctccaggccgccgccggaatcacccac
tggatctgcgagaacgccaagtcggcccgcgcctatctgaagcggatcgacgcgatcgtt
ccgctggctgcgccgctgcaggcgcaggacatccgggaactgccgcgcgaggtgcacaag
aagggcgatcacgcaggccagttcgacgctcgccctcttctggccgctgcgctggaaggc
cgcgacatcggcctgctgagcgaagcgggcatgccggcggtggccgatcccggctcctcg
gtggcgcgcgccgcgcatgaccttggcattgccgtggtgccgctcaccggccccgtatcc
ctgctgctggcactggcggcgagcggcctcaacggccagaacttcgccttcgtcggctac
ctgccgcaggatgccggcgagcgccaggtgcgcatccgggaactcgaggcgctggcgctc
aagacgggccagacgcagctgttcatcgaaacgccctaccgcaacgccgcgctgcttcag
gcgctggtgcaaacgctgcagcacaacacccggctcgcggtggcacgcggcctcacgctc
gccagcgcccatgtgcgcagcgaaaccgtgaaatcctggcgcgccaaggcgccgcagggg
acttcggacgaacgcctgcctgccgtgttcgcgatcgggcgctga

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