Variovorax paradoxus B4: VAPA_1c15960
Help
Entry
VAPA_1c15960 CDS
T02835
Name
(GenBank) putative ABC transporter, substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c15960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c15960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c15960
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c15960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AGU48708
UniProt:
T1X828
LinkDB
All DBs
Position
1:1732630..1733793
Genome browser
AA seq
387 aa
AA seq
DB search
MKSLMQILTRGALAAALTACGVASAFAADLKVGLSVSLSGPNSSLGVPYAKGMQAALAYK
PEINGRKVQLIVLDDGSDPTTAGRNARKLIEEDKVDVLMGTSGVPAAIAMAQVGKEAKVP
MIGLTPILLDANENPWVMTVAQPTQLMIDAVVERMKRNNVKTVGYIGFTDAWGDLVYNAL
MKAAPEAGIKVVSNERYARADASVTGQVLKIVALRPDAVMTGGAGTPGALPFLALQERGY
KGGVYGQHGLINPDFVRVVGASGQNALMPTGPVIVAEQLPDSHPTKKIATDFRAVFQKVN
NAPTSDAFSAYSFDGWLVFADAASRAMKKAEPGTAEFRVALRDAIFSTKEVVGTHGVYTF
KPGSLYGVDERARVIVKLDNGQWKLAP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcctgatgcagatcttgacgcgcggtgccctcgccgcggcgctgaccgcctgt
ggtgttgcaagcgcattcgcggccgacctcaaggtcggcctgagcgtgtcgctgtcgggg
ccgaactcctcgctgggcgtgccctacgccaagggcatgcaggccgcgctggcctacaag
ccggagatcaacggccgcaaggtgcagctcatcgtgctggacgacggctccgacccgacc
acggccgggcgcaatgcgcgcaagctgatcgaggaggacaaggtcgatgtgctgatgggc
acctcgggcgtcccggccgccattgcgatggcgcaggtgggcaaggaagccaaggtgccg
atgatcgggctcactcccatcctgctcgacgcgaacgagaacccgtgggtcatgacggtg
gcgcagcccacgcagctgatgatcgatgcggtggtcgagcgcatgaagcgcaacaacgtc
aagacggtcggctacatcggcttcaccgatgcctggggcgatctggtctacaacgcactg
atgaaggccgcacccgaggccggcatcaaggtggtgagcaacgagcgctacgcgcgcgcc
gatgcctcggtgaccgggcaggtgctgaagatcgtcgcgctcaggcccgatgcggtgatg
accggcggcgccggcacgccgggcgcgctgccgttccttgcgctgcaggagcgcggctac
aagggcggcgtgtacggccagcacgggctgatcaaccccgacttcgtgcgcgtggtcggc
gcctcggggcagaacgcgctgatgcccaccggcccggtgatcgtggccgagcaactgccc
gacagccatccaacgaagaagatcgcgaccgatttccgcgccgtgttccagaaggtcaac
aacgcacccaccagcgatgcgttctcggcctattccttcgacggctggctggtgtttgcc
gatgccgcttcgcgcgccatgaagaaggccgagccgggaaccgccgagttccgcgtcgca
ttgcgcgatgccatcttcagcaccaaggaagtggtgggcacgcacggcgtctacaccttc
aagcccggcagcctctacggggtggacgaacgcgcacgcgtgatcgtcaagctcgacaac
ggccaatggaagctcgcaccttga
DBGET
integrated database retrieval system
