Variovorax paradoxus B4: VAPA_1c15970
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Entry
VAPA_1c15970 CDS
T02835
Name
(GenBank) putative ABC transporter, permease protein
KO
K01997
branched-chain amino acid transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c15970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c15970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c15970
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c15970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AGU48709
UniProt:
T1X8S1
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All DBs
Position
1:1733837..1734892
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AA seq
351 aa
AA seq
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MTWDVALILVTDGLANGAVYLLAGLGLVLIFSVTRVVFVPFGDIAAFAALSLAAFETGRV
PPTIGMVAVLAALALATEIGSLLRRGEASRIPKAVLMWGVLPAIPCLLAWLAARPGVPVA
VHIAVAVLLVVPIAPLLARVVFQPIADASVLVLLIVSLALHFLLSGLGLLFFGPEGSRTT
PLTSAAFTLGDGFTVSGQVVLMVGAAIVLSGLFFLVFERTVAGKALRATAVNRVGARLVG
IRPVRTALLAYGCASLLAGLIGVLIAPVTTMYYDSGFIIGLKAFVAAIIGGLVSYPMTAV
GALAVGVVESFASFWSGALKDVIVFSLLIPVLMLRSFMAAHAEEEEDEVDQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacatgggacgtggcgctgattctcgtcaccgatggcctggccaacggtgccgtctat
ctgctggccgggctcgggctggtcttgatcttttccgtcacgcgggtggtgttcgtgccg
ttcggcgacatcgcggccttcgcggccctgtcgctcgcggccttcgaaaccggtcgcgtg
ccgccgaccatcggcatggtcgcggtgctcgcggcgctcgcgctggcgacggagatcggc
agcctgctgcggcgtggggaggcctcgcgcattcccaaggcggtgctgatgtggggcgtg
cttcctgcgattccgtgcctgctggcgtggctggcggcgcggcccggcgtgccggtggcg
gtgcacatcgcggtggccgtgctgctggtggtgcccattgcgccgctgctcgcgcgggtg
gtgttccagccgatcgcggatgcctcggtgctggtgctgctgatcgtgtcgctggcgctg
catttcctgctgtcgggcctgggccttctgttcttcggccctgaaggctcgcgcaccacg
ccgctcacgagcgccgcgttcacgctgggcgacggcttcacggtcagcggccaggtggtg
ctgatggtgggcgcggccatcgtgctgagcgggctgttcttcctggtgttcgagcgcacg
gtggcgggcaaggcgctgcgcgccacggccgtgaaccgggtcggcgcgcggctggtgggc
atccggccggtgcgcacggcgctgctggcgtatggctgcgcctcgctgctggccgggctc
atcggcgtgctgatcgcgccggtgaccaccatgtactacgactcgggtttcatcatcggc
ctgaaggccttcgtggccgcgatcatcggtgggctcgtgagctacccgatgacggccgtg
ggcgcgctcgccgtgggcgtggtggaaagcttcgcctcattctggagcggagcgctgaaa
gacgtgatcgtgttcagcctgctgattccggtactcatgctgcggtcgttcatggcggcc
catgccgaagaggaagaagacgaggtggaccaatga
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