Variovorax paradoxus B4: VAPA_1c15990
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Entry
VAPA_1c15990 CDS
T02835
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c15990
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c15990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c15990
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c15990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
DO-GTPase2
AAA_22
SMC_N
AAA_30
AAA_27
AAA_16
BCA_ABC_TP_C
AAA_33
MukB
Mg_chelatase
T2SSE
NB-ARC
AAA_14
AAA_15
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AGU48711
UniProt:
T1X8A6
LinkDB
All DBs
Position
1:1736759..1737490
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AA seq
243 aa
AA seq
DB search
MTAMLEIGDLHVSYGQVEAVRGVSLDLQPGQIISVIGPNGAGKTTLLAAAMGLLPCKGTL
RFEGEDLQGLDVEARVERGLCLVPEKRELFGELTVLDNLQLGAYARRLRSDAMKRQLQSV
YDRFPRLAERRSQRADTLSGGERQMLAVGRALMSAPRLLMLDEPSLGLAPLIVRDILSIV
RKLREDGVSILLVEQNARAALETSDHGYVLETGEIALSGASGELASDPRVQATYLGGGTH
DDE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgatgctggagattggcgacctgcacgtctcgtacgggcaggtcgaggcggtg
cgcggcgtgtcgctcgacctgcagccggggcagatcatctcggtgatcgggcccaacggc
gcgggcaagaccacgctgctcgcggctgcgatggggctgctgccctgcaagggcacgctg
cgcttcgagggcgaagacctgcagggcctcgacgtggaggcgcgcgtggagcgcggcctg
tgcctggtgccggagaagcgcgagctgttcggcgagctcaccgtgctcgacaacctgcag
ctcggcgcctatgccaggcggctgcgcagcgatgcgatgaagcgccagctgcaatcggtg
tacgaccgcttcccgcgcctggccgaacgccgctcgcagcgcgccgacacgctctcgggc
ggcgagcggcagatgctcgcggtgggccgtgccctgatgtccgcgccgcgcctgctgatg
ctcgacgagcccagcctcgggctcgcgccgctgatcgtgcgcgacattctttccatcgtg
cgcaagctgcgcgaggacggcgtctcgatcctgctggtggagcagaacgcgcgcgccgcg
ctcgagacctcggaccacggctacgtgctggaaaccggcgagatcgcgctgtcgggcgca
tcgggcgaactggcgagcgatccgcgggtgcaggccacctacctgggcggaggcacgcac
gatgacgagtga
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