Variovorax paradoxus B4: VAPA_1c16420
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Entry
VAPA_1c16420 CDS
T02835
Name
(GenBank) putative aspartate racemase
KO
K01779
aspartate racemase [EC:
5.1.1.13
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00250
Alanine, aspartate and glutamate metabolism
vpd00470
D-Amino acid metabolism
vpd01054
Nonribosomal peptide structures
vpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VAPA_1c16420
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VAPA_1c16420
09109 Metabolism of terpenoids and polyketides
01054 Nonribosomal peptide structures
VAPA_1c16420
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
vpd01008
]
VAPA_1c16420
Enzymes [BR:
vpd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.13 aspartate racemase
VAPA_1c16420
Polyketide biosynthesis proteins [BR:
vpd01008
]
Nonribosomal peptide tailoring proteins
Others
VAPA_1c16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
AGU48752
UniProt:
T1X750
LinkDB
All DBs
Position
1:1775819..1776556
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AA seq
245 aa
AA seq
DB search
MASTNVVGILGGMGPAAGADFVRLFVQACAQQMRSRGEPVRDQSFPEHWLAQVPVPDRTD
ALGSAENGAHQPLEPMLQALGRLAALGSQAVAIACNTAHAWHARLQERFPQVELLHMARE
VAQHLAAQGAGNVALMATEGTYRVRLYDQALADAGLDCHVPLAEERRIITRGIFDGVKAG
NMQLAEACFSQVALQLAQRHGPVTIIMGCTEVPLGLQGSAAVAGLSLVDPAQVLAAALAR
RAYRD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacgaacgtagtcggcattctgggcggcatgggccctgcggcgggggccgac
ttcgtccggctgttcgtgcaggcctgtgcgcagcagatgcgctcgcgcggggaaccggtg
cgggaccagtcctttccggagcactggctggcgcaggtgccggtgcccgaccgcaccgat
gcgctgggctcggccgagaacggcgcacaccagccgctcgagccgatgctgcaggcgctc
gggcgccttgccgcgctgggcagccaggcggtagccattgcctgcaacaccgcgcatgcc
tggcatgcccggctgcaggaacgcttcccgcaggtcgagctgctgcacatggcgcgcgag
gtggcgcagcatcttgccgcgcagggtgcgggcaacgtggcgctgatggccaccgaaggc
acctaccgcgtgcggctctacgatcaggcgctggccgacgcggggctcgattgccatgtg
ccgctggccgaagagcgccgcatcatcacgcgcggcatcttcgacggcgtcaaggcaggc
aacatgcagctcgccgaagcgtgcttttcgcaagtggcgctgcaactcgcgcaacgccac
gggccggtcaccatcatcatgggctgcaccgaggttccgctcgggctccagggctcggcc
gccgtggccgggctgagcctggtcgacccggcgcaggtgctggccgccgcgctggcgcgc
cgcgcctaccgcgactag
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