Variovorax paradoxus B4: VAPA_1c16740
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Entry
VAPA_1c16740 CDS
T02835
Name
(GenBank) transcriptional regulator, LysR family
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c16740
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VAPA_1c16740
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AGU48783
UniProt:
T1X8A4
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All DBs
Position
1:1811741..1812688
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AA seq
315 aa
AA seq
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MQVKAKAQNSARNRAVLGQLSDMDLRLLKVFKSVVDCGGMAAAELELNIGTSTVSRHVKD
LETRLGLVLCRRGRAGFALTAEGQRVYDETLRLLASVDAFRGSIDDIHNRMGGQLDVALF
DKTATNPKARIGEAIARFTELAPEVNLAVHVGSINAIEQGVLEGNFQIGIIPAHRASKSL
VYADLFDETMLLYCGAGHPLFGSSHAKLTWAKLREHHFAGLGYHSPNMELSHRARLSRRA
TGFDQEAIATLILSGRFLGFLPDHYAQVFEQRGLMKAVLPARFNYACRFVSLLRRSPKPS
RAVLAFQECLEKAHA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaggcgaaagcccaaaacagtgctcgcaaccgtgccgtcttggggcagctc
agcgacatggacctgcgcctgctcaaggtgttcaagagcgtggtcgactgcggcggcatg
gcggcggcggagctggagctcaacatcggcacctccaccgtgagccggcacgtgaaggac
ctggaaacccggctcggcctggtgctgtgccggcgcggccgggccggcttcgcgctcacg
gccgagggccagcgcgtgtacgacgagacgctgcgcctgctggcctcggtcgacgccttt
cgcggcagcatcgacgacatccacaaccgcatgggcggccagctcgacgtggcgctgttc
gacaagacggccaccaacccgaaggcgcgcatcggcgaagccatcgcgcgcttcaccgaa
cttgcgccagaggtgaacttggcggtgcatgtgggctcgatcaacgccatagagcagggc
gtgctcgaaggcaacttccagatcggcatcatcccggcgcaccgcgcctcgaagagcctg
gtgtacgccgacctgttcgacgagacgatgctgctgtattgcggcgcggggcatccgctc
ttcggcagcagccacgcaaagctcacgtgggcgaagctgcgcgagcatcacttcgcgggc
ctgggctaccactcgcccaacatggaactgagccaccgcgccaggctgtcgcgcagggcc
acgggcttcgaccaggaggcgattgcgacgctgattctttcggggcgcttcctgggcttt
ctgcctgaccactatgcgcaggtgttcgagcagcgcgggctgatgaaggccgtgctgccg
gcgcggttcaactacgcgtgccggttcgtgagcttgctgcggcggtcgccgaagccttca
cgggcggtgctggcgtttcaggagtgcctggagaaggcgcatgcctga
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