Variovorax paradoxus B4: VAPA_1c16780
Help
Entry
VAPA_1c16780 CDS
T02835
Name
(GenBank) amino acid/amide ABC transporter, permease protein
KO
K01998
branched-chain amino acid transport system permease protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c16780
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c16780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c16780
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c16780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
AGU48787
UniProt:
T1X782
LinkDB
All DBs
Position
1:1815878..1816840
Genome browser
AA seq
320 aa
AA seq
DB search
MPKKITFLLALVVALVLPLVLRSGSLASEVLIYALAALGCNLLLGYTGLLSFGQGIFFGL
GSYTIAILLTRLSLPMPLALLAAIAMGALGAAVVGWVAIRQRGTYFVMLTLAFAQMFYFV
AYTASGLTGGDNGLLDVPRPAFMDTPWKYYAFVAVMFLIAFGLLLRVTDSVFGRTLLAIR
DNEDRAAAVGYDLKRFKLLAFVISGAVTGLAGGLHAMMTGIAPLSNAEYHTSEMILVITV
IGGTGNLFASVLGSAFYVLLADWLSTLWPRWLLLLGLLLIGVSIGMQRGLWGLGESAWRR
VFRKAPPSVAAAPGVKGEKA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaaaaatcactttcctgctggcgctcgtcgttgcgctggtcctgccgctggtg
ctgcgctcgggttcgctcgcgagcgaggtgctgatctatgcgctggcggccctgggctgc
aacctgctgctgggctacacggggctgctgtcgttcgggcagggcatcttcttcgggctg
ggcagctacaccatcgcgatcctgctcacgcggctttctctgccgatgccgcttgccttg
cttgcggccattgccatgggcgcattgggcgcggcggtggtcggctgggtcgcgatccgc
cagcgcggcacctatttcgtgatgctcacgctggccttcgcgcagatgttctatttcgtg
gcgtacaccgcttcgggactcacgggcggcgacaacgggctgctcgacgtgccgcgcccc
gccttcatggacacgccctggaagtactacgccttcgtggccgtgatgttcctcatcgcc
ttcggcctgctgctgcgcgtgaccgattcggtcttcggccgcacgctgctcgccatccgc
gacaacgaggaccgcgccgccgcggtgggctacgacctcaagcgcttcaagctgctggcc
ttcgtgatctcgggcgccgtcaccggcctggcgggcgggctgcacgccatgatgaccggc
atcgcgccgctgtcgaatgccgagtaccacacgagcgagatgatcctggtcattaccgtg
atcggcggcaccggcaacctgtttgcctcggtgctgggctcggccttctacgtgctgctg
gccgactggctctccacgctgtggccgcggtggctgctgttgctggggctcttgctgatc
ggcgtgagcatcggcatgcagcgcggcctctggggcctgggcgaaagcgcatggcgccgt
gtgttccgcaaggcgccgccttcggtggcggccgcgcctggcgtgaagggagaaaaggca
tga
DBGET
integrated database retrieval system
