Variovorax paradoxus B4: VAPA_1c17040
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Entry
VAPA_1c17040 CDS
T02835
Name
(GenBank) putative TRAP dicarboxylate transporter, subunit DctP
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VAPA_1c17040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c17040
Transporters [BR:
vpd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VAPA_1c17040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Gluconate_2-dh3
HTH_Tnp_IS630
Motif
Other DBs
NCBI-ProteinID:
AGU48813
UniProt:
T1X8D4
LinkDB
All DBs
Position
1:complement(1841416..1842384)
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AA seq
322 aa
AA seq
DB search
MNHKFGIALAGLTLGAAAFAQTKWDLPTAYPAGNYHTENITQFASDVEKASAGKLKITVH
ANAALFKAPEIKRAVQGGQAQLGEILLVNYQNEWQMFGADGIPFLADSYDAAWKLYQAQK
PALEKKLAEQGLALLYTVPWPPQGIYVKKPISSAADLKGVKWRAYSPATARVAELVGAQP
VTVQQAELSQAMATGVIESYMSSGSTGYDTKTYEYIKNFYDTQAWLPKNAVLMNKKAFDA
LDKPTQEAVLKAAAEAEKRGWDISKKKTLEYIDLLKKNGMAIHVPSDQLKADMKKVGDTM
LKEWLEKAGPDGQAVVDAYKKM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacaagttcggcattgccctcgctggcctcaccctcggcgccgcggccttcgcg
caaaccaagtgggacctgcccacggcctaccccgccggcaactaccacaccgaaaacatc
acgcagttcgccagcgacgtggaaaaggcgtccgccggcaagctcaagatcaccgtccat
gcgaatgccgcgctgttcaaggcgcccgagatcaagcgcgccgtgcaaggcggccaggcc
cagctgggagagatcctgctggtgaactaccagaacgaatggcagatgttcggcgccgac
ggcatcccgttcctggccgacagctacgacgccgcatggaagctgtaccaggcgcagaag
ccggcgcttgaaaagaagctggccgagcagggcctcgcgctgctgtacaccgtgccctgg
ccgccccagggcatctacgtgaagaagccgatctcctccgcggccgacctcaagggcgtc
aagtggcgtgcctacagccccgccaccgcgcgggtcgccgagctcgtcggcgcacagccg
gtcacggtgcagcaggccgaactctcgcaggccatggccaccggcgtgatcgagtcgtac
atgtcgtcgggttccaccggctacgacaccaagacctacgaatacatcaagaacttctac
gacacccaggcctggcttcccaaaaatgcggtgctgatgaacaagaaggccttcgacgcg
ctcgacaagcccacgcaggaggccgtactgaaggccgccgccgaggcggagaagcgcggc
tgggatatctcgaagaagaagacgctcgaatacatcgatctgctcaagaagaacggcatg
gccatccacgtgccttcggaccagctcaaggccgacatgaagaaggtgggcgacaccatg
ctcaaggaatggcttgagaaggccggacccgatggccaggcggtggtcgacgcatacaag
aagatgtga
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