Variovorax paradoxus B4: VAPA_1c17150
Help
Entry
VAPA_1c17150 CDS
T02835
Symbol
gyrA
Name
(GenBank) DNA gyrase, subunit A GyrA
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpd03032
]
VAPA_1c17150 (gyrA)
03400 DNA repair and recombination proteins [BR:
vpd03400
]
VAPA_1c17150 (gyrA)
Enzymes [BR:
vpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VAPA_1c17150 (gyrA)
DNA replication proteins [BR:
vpd03032
]
Prokaryotic type
DNA Topoisomerases
VAPA_1c17150 (gyrA)
DNA repair and recombination proteins [BR:
vpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VAPA_1c17150 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AGU48824
UniProt:
T1X912
LinkDB
All DBs
Position
1:complement(1852795..1855440)
Genome browser
AA seq
881 aa
AA seq
DB search
MTSFAKETLPISLEEEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADIDKETVDFQDNYDGSEKEPKVLPSKLPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLHMLRNPQATIDELMEIVPAPDFPTAGIIYGINGVRDGYRTGRGKV
VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKDLIEVFLQHRRE
VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKSELMTRSWDSKLV
REMLTRSRADGGVVNADDYRPEGLEREFGMGSDGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYKEVMAEIDDLLDILSKPERVSVIIGDELGTIKHEFGQSKLGARRSLVEHSAYDL
STEDLITPTDMVVTLSHSGYIKSQPLGEYRAQKRGGRGKQATVTKEDDWIDQLFIANTHD
YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVALALTGEKRNFPADQ
YVFMATSMGTVKKTTLDEFNNPRKGGIIAVNLDEGDYLIGAALTDGKHDVMLFSDGGKAV
RFDEEDVRPLGRNARGVRGMSLDPGQGVIAMLVAEDEQQSVLTATENGYGKRTSITEYTR
HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVAEIRELGRATQGVT
LIGLDEGAKLSGLQRIVENDANGESEPGADDTSSSSTENPQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttcgccaaagaaaccctgcccatcagtcttgaagaggaaatgcgcagcagc
tatctcgactacgccatgagcgtgatcgtgggccgggcgcttcccgatgcgcgcgacggc
ctcaagcctgtgcaccggcgcgtgctgtatgccatgcacgagctcaacaacgactggaac
cgggcctacaagaaatccgcccgcatcgtgggcgacgtgatcggtaagtaccacccgcac
ggcgatcaatccgtttacgacaccatcgtgcggctggcgcaggacttttccatgcgccat
atgctggtcgacggccaaggcaacttcgggtcggtcgacggagacaacgcagccgcaatg
cggtatacggaaatccggctggccaaaattgcgcacgaaatgctggccgatatcgacaag
gaaactgtcgattttcaagacaattacgacggctccgaaaaagagccgaaggtccttcca
agcaaactgccgaatttgctggtgaatggctcaggcggtattgcggttggcatggccacc
aatattccgccgcacaatctcaatgaggtggtggacgcctgcctgcatatgctgcgcaat
ccgcaggcaaccatcgacgaactgatggaaatcgtgccggcgcccgacttcccgaccgcc
ggcatcatctacggcatcaatggcgtgcgggacggctaccgcaccggccgcggcaaggtc
gtgatgcgcgccaagtgccacttcgaggacatcgaccgcggccagcgccaggcgatcatc
gtcgacgagctgccctaccaggtcaacaagaagacgctgcaggagcgcatggccgagctg
gtgcacgagaagaagatcgaaggcatcagccacatccaggacgaatccgacaagtcgggc
atgcgcctggtgatcgagctcaagcgcggcgaagtgcccgaggtggtgctcaacaacctg
tacaagcagacccagctgcaggacaccttcggcatcaacatggtggcgctggtcgacggc
cagcccaagctgtgcaacctgaaggacctgatcgaggtcttcctgcagcaccgccgcgaa
gtggtcacgcgccgcaccgtcttcaccctgcgcaaggcccgcgaacgcggccacgtgctc
gaaggcctggcggtggcgctggccaacatcgacgagttcatccgcatcatccgcgaatcg
cccaccccgccggtcgccaagtccgaactgatgacccgcagctgggacagcaagctggtg
cgcgagatgctgacgcgttcgcgcgccgacggcggcgtggtcaatgccgacgattaccgc
cccgagggcctcgaacgcgagttcggcatgggctcggacggcctctaccggctgtcggag
acgcaggcgcaggaaatcctgcagatgcgcctgcagcgcctgaccggcctcgagcaggac
aagatcgttgccgaatacaaggaggtcatggcagagatcgacgacctgctcgacatcctg
tccaagcccgaacgggtctcggtcatcattggcgacgagctcggcaccatcaagcacgag
ttcggccagtcgaagctcggcgcgcgccgcagcctggtggaacacagcgcctacgatctc
tcgaccgaagacctgatcacgcccaccgacatggtggtgacgctttcccacagcggctac
atcaagagccagccgctgggcgaataccgcgcgcaaaagcgcggcggacgcggcaagcag
gcaacggtcaccaaggaagacgactggatcgaccagctcttcatcgccaacacgcacgac
tacatcctgtgcttctccaaccgcggccggctgtactggctcaaggtgtgggaagtgccc
gcgggttcgcgcggctcgcgcggccgccccatcgtcaacatgttcccgctgcaggaaggc
gagaagatcaacgtggcgctcgccctgaccggcgagaagcgcaacttcccggccgaccag
tacgtgttcatggccacctcgatgggcacggtcaagaagaccaccctcgacgaattcaac
aacccgcgcaagggcggcatcattgccgtgaacctcgacgagggcgactacctcatcggc
gccgccctgaccgacggcaagcacgacgtgatgctgttcagcgacggcggcaaggccgtg
cgcttcgacgaagaagacgtgcgcccgctgggccgcaacgcacgcggcgtgcgcggcatg
tcgctcgaccccgggcaaggcgtgatcgcgatgctggtggccgaggacgagcagcaaagc
gtgctcaccgccacggaaaatggttacggaaagcgtacaagcattaccgagtacacgcgc
catggccgcggaaccaaaggcatgatcgcgattcaacagagtgagcgcaacggcaaggtc
gttgccgccaccctcgtgcatgcggacgatgagatcatgctcatcaccgacaagggcgtg
cttgtgcgcacccgggtcgccgagattcgtgaactgggtcgcgcaacgcaaggcgttacg
ctgatcgggctcgacgaaggcgccaaactcagcggactacaacgtatcgtcgaaaacgac
gccaacggcgagagcgagcctggcgcggacgatacttcctcatcttcaacggagaaccct
cagtga
DBGET
integrated database retrieval system
