Variovorax paradoxus B4: VAPA_1c17470
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Entry
VAPA_1c17470 CDS
T02835
Symbol
kaiC
Name
(GenBank) putative circardian clock protein kinase KaiC
KO
K08482
circadian clock protein KaiC
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
VAPA_1c17470 (kaiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
AAA_22
nSTAND3
AAA_16
IstB_IS21
SLFN-g3_helicase
RecA
GvpD_P-loop
NPHP3_N
AAA_18
Rad51
AAA_30
Zeta_toxin
MEDS
CbiA
NACHT
AAA
AAA_7
AAA_29
PAXNEB
AAA_33
ResIII
MeaB
AAA_5
AAA_19
AAA_14
AAA_28
PhoH
divDNAB
ParA
Motif
Other DBs
NCBI-ProteinID:
AGU48855
UniProt:
T1X9K4
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All DBs
Position
1:1881462..1882961
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AA seq
499 aa
AA seq
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MKLDDTAVPSTQDGLMKVGVPGLDDVLGGGLTSNRLYLVEGTPGAGKTTIALQFLIEGAR
RGESVLYVTLSETAQELRGVALSHGWDLSGIEVREMLPSEAALEPDEQYTMFHPSEVELS
ETTLRILSDVDVLKPSRVVFDSLSELRLLAGSSLRYRRQILALKQFFAGRQCTVLLLDDM
TAMKHDLQVQSIAHAVVRLEQISSDYGAARRRLIVSKYRGQQFRGGYHDYRIERGGLRVF
PRLVASEHSSALTQERIPSGLDSLDTLLGGGLERGTSTLFVGAPGTGKSTVAVQFALAAA
QRGECAALFIFDESIYTLRTRCESMGMDLAPHIESGRIKVRQVDPAELSPGEFVHLIRLA
VVECGAAVVVIDSLNGYLNAMPDERFLIVQLHELLSYLGQAGVATLLVGAQHGLIGMQMQ
TPVDASYLADAVVLLRYFELDGEVRQAISVLKKRGGAHERTIRDFSMTATGLRVGEPLRH
FRGILTGIPIPTDGVQLAS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgacgacacggcagtgccgtccacgcaggacggcctgatgaaagtcggtgtt
cccggcctcgacgacgttcttggcggcgggctcacgtccaatcgcctctaccttgtcgaa
ggcacccccggcgccggcaagaccaccatcgcgcttcagttcctgatcgagggcgccagg
cgcggcgaatcggtgctgtatgtcacgctgtctgaaacagcccaggagcttcggggcgtg
gcgctttcccacggctgggacctgagcggcatcgaggtgcgcgagatgcttccgtcggaa
gccgcgctcgagccggacgagcagtacaccatgttccatccgtccgaggtcgaactcagc
gagacgaccttgaggatcctttccgatgtcgatgtgctcaagccgtcgcgcgtggtgttc
gattcgctgtccgaattgcgcctgctggccggcagctcgctgcgctacaggcggcagatc
ctggcgctcaagcagttctttgccggccgccaatgcacggtgctgttgctggacgacatg
acggccatgaagcacgacctccaggtgcagagcatcgcccacgccgtcgtgaggctggag
cagatcagctccgactacggcgccgcgcgacgccggctcatcgtcagcaaataccggggc
cagcagttccgcggcggctaccacgactaccggatcgagcgcggcggcttgcgcgtcttt
ccgcgcctggtcgcgtccgagcattcttcggcgttgacgcaggagcggattcccagcggc
ctggattcgctcgataccttgctgggtgggggcctcgagaggggcacgagcacgctgttc
gtcggcgcgccgggcaccggcaagtcgacggtggcggttcagttcgcgctggccgcggca
cagcgcggcgaatgcgcggccctcttcatcttcgacgagagcatctacacgctgcgtacg
cgctgcgagagcatgggcatggacctggctccgcacatcgaatccggccgcatcaaggtg
cggcaggtcgaccctgccgaactgtcgccgggcgagttcgtgcacctgatccggctggcg
gtggtggagtgcggtgcggcagtggtggtgatcgacagcctcaatggctatctcaacgcc
atgcccgacgagcgctttctgatcgtgcaactgcacgaactgctttcctacctggggcag
gccggcgttgccacactgctggtgggcgcgcagcacggcctcatcggcatgcagatgcag
acgcccgtggatgcgagctacctggcggacgccgtggtgctgcttcgctatttcgaactc
gacggagaagtgcgccaggcgatctcggtgctgaagaagcgcggcggtgcgcacgagcgg
accatccgcgatttctccatgacggccacaggcctcagggtcggcgagccgctgcgccat
ttcagaggcatcctgacgggcatccccattcccaccgacggcgtgcagctcgcatcgtga
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