Variovorax paradoxus B4: VAPA_1c18240
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Entry
VAPA_1c18240 CDS
T02835
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
KO
K25184
outer membrane protein PltN
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c18240
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Pyoluteorin transporter
VAPA_1c18240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AGU48932
UniProt:
T1X7L7
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All DBs
Position
1:complement(1954425..1955957)
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AA seq
510 aa
AA seq
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MPASRTLFAYSVLALLLGGCAVGPDHRPAQVQAPTDWSAWHGGSAALLGAERKAAPAGVA
SGDWKAFGDPLLDRLQARALAANHDLQTAALRFAQSRVQRTAAAAQQAPQLNASGSVSRQ
RQSESGTATRMIDALGSSVANRDQLIRTLSEPYNLYQAGFDASWEIDLWGRVRRSIEAAD
ADTGASAALLQQAQLSVQAEVARSYFELRGAQRELRLARADIAAAAESLELVQARADGGL
VTDLDPTRQRTQLAELRARIPMLLQQEAQAMNQITLLAGASPGTLNAELAPPSDGAGDTL
EALQASPLPDLALGLPSDVARQRPDIAAAEAQLHAATARIGVAVADLYPRVTLGAGFGYE
SAGSERFGEWGSRQWHVGPSISLPIFDNGRRRSTVNLRELQQQEAAVAFQQTVLKAWHEI
DSALSAYTAERQRHAELVERERSSRDALTLAHARYANGLTDFGVELDARRTLLQARRDQV
QSTSRMAVGMVAVYKALGGTMPPAVAAAPG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcatcacgcaccctcttcgcatattccgtgcttgcgcttctgctgggtggatgc
gccgtggggcccgaccaccggcccgcgcaagtgcaggcgcccaccgattggtccgcatgg
cacggcggctcggcggcgctgctcggcgccgagcgcaaggccgcgccggcgggcgtcgca
tccggcgactggaaggccttcggcgatccgctgctcgaccgcttgcaggcccgcgcgctg
gccgccaaccatgacctgcaaaccgctgccctgcgcttcgcgcaaagccgcgtccagcgc
accgcggcggcggcgcagcaggcgccgcagctcaatgccagcggcagcgtcagccggcag
cgccagagcgagagcggcaccgcgacgcggatgatcgatgcgctgggctcgtcggtcgcc
aaccgcgaccagctgatccgcacgctcagcgagccctacaacctctaccaggccggtttc
gatgcctcgtgggaaatcgacctctggggccgcgtgcggcgcagcatcgaggccgccgat
gcggacaccggcgcatcggccgcgctgctgcagcaggcgcagctcagcgtgcaggcggag
gtggcgcgcagctacttcgagttgcgcggtgcacagcgtgaactgcgcctggcccgggcc
gacatcgcggccgcggccgagtcgctcgagctggtgcaggcacgtgccgacggcggactg
gtcaccgacctggacccgacgcgccagcgcacgcagctggccgagctgcgcgcgcgcatt
ccgatgctgctgcagcaggaggcgcaggccatgaaccagatcacgctgctggccggcgca
tcgcccggcacgctgaacgccgaactcgcgccaccttccgacggcgcgggcgacacgctc
gaagcgctgcaggcatcaccgctgcccgaccttgcgctgggcctgccttccgatgtggcg
cgccagcgccccgacatcgccgcggcagaggcgcaattgcatgccgccaccgcgcgcatc
ggcgtggccgtggcagacctctatccgcgcgtcacgctcggtgcgggcttcggctacgaa
tcggccggcagcgagcgctttggcgaatggggcagccggcaatggcatgtcggcccctcc
atcagcctgcccatcttcgacaacggccggcgccggagcacggtgaacctgcgcgagctg
cagcagcaggaagccgcggtggccttccagcagaccgtgctcaaggcctggcatgaaatc
gattcggcgctgagcgcctacaccgccgagcgccagcgccacgccgagctggtcgagcgc
gagcgcagcagccgcgacgcactcacgctcgcgcatgcgcgctatgcgaacgggctcacg
gatttcggcgtcgaactcgacgcccgccgcacgctgctgcaggcccggcgcgaccaggtg
cagagcacgagccgcatggcggtcggcatggtggcggtctacaaggcgctcggcggcacc
atgccgcccgccgtcgctgcggcaccgggctag
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