Variovorax paradoxus B4: VAPA_1c18290
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Entry
VAPA_1c18290 CDS
T02835
Name
(GenBank) transcriptional regulator, TetR family
KO
K23777
TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c18290
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VAPA_1c18290
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GFIT
Motif
Pfam:
TetR_N
CecR_C
Motif
Other DBs
NCBI-ProteinID:
AGU48937
UniProt:
T1X7M2
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Position
1:1961164..1961883
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AA seq
239 aa
AA seq
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MATRSSNPRSPAVREGAARIQRTDGSTTRLHILETAGQLFAERGFAESTSKEICTRAGTN
MAAVNYHFGSRDGLYEAVLIEAHRQLVSMDELVSLASEAGDPRFKLRAFLTHLIELGSQP
RAPWGFRVVLREALSPSPALPALIRQAVLPKARLIRGLIGGIMGLPEDHPSVQRALLFAV
LPCIVMTVAPKDLAGKVLPALKDAEGLADDLMRYVFAGLDAIAKEAARTAAPARAGKRR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacgctcttccaatccccgttcccccgctgtgcgcgagggtgcggcgcgcatc
cagcgcaccgacggcagcaccacgcgcctgcacatcctcgaaaccgcgggccagctgttt
gcggagcgcggcttcgccgagagcaccagcaaggaaatctgcacgcgcgccggcaccaac
atggcggcggtcaactaccacttcggcagccgggacgggctctatgaagccgtgctgatc
gaggcgcaccgccagctcgtgagcatggacgaactggtcagcctggccagcgaggctggc
gatccgcggttcaagctgcgcgcgttcctcacgcacctgatcgagctgggcagccagccc
agggcaccctggggattccgggtggtgctgcgcgaggcgctgtcgccttcgccggcgctg
cctgcgctgatccggcaggcggtgctgcccaaggcccggctgatccgcggcctgatcggc
ggcatcatgggcctgcccgaggaccatccctcggtgcagcgggccctgctgttcgcggtg
ctgccctgcatcgtgatgaccgtggcccccaaggacctggccggcaaggtgctgccggcc
ctgaaggatgccgagggcctggcggacgatctgatgcgctacgtgttcgccggcctcgat
gccatcgcgaaggaggcggccaggaccgcggcgcctgctagagctggaaagcgacggtga
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