Variovorax paradoxus B4: VAPA_1c18330
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Entry
VAPA_1c18330 CDS
T02835
Name
(GenBank) transcriptional regulator, GntR family
KO
K11475
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c18330
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
VAPA_1c18330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_24
HTH_29
PaaX
HTH_11
TrmB
FaeA
HTH_AsnC-type
HTH_IclR
Fe_dep_repress
HTH_28
SIP
Motif
Other DBs
NCBI-ProteinID:
AGU48941
UniProt:
T1X8Y0
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All DBs
Position
1:1965254..1966027
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AA seq
257 aa
AA seq
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MKAAAAPPAEPVDGGGSQAVKAQLRLREMILAGELPGGARIAEVAISEQLGVSRTPVRSA
LMRLEQEGLLEALPNGGYAVRTFSERDVADAIELRGTLEGLVARLAAERGAAPVVLREAR
ACLARIDELLREPALDDAAFSRYVTHNEKFHSLLCEMAASPVIAQQLERVVNLPFASPSG
FVIVQANSPAARDMLVIAQDQHLQVLDAIEAGEGSRAEALMREHSRLARRNLREALHGTP
SAEQRPLPGVQLIRRRG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccgcagctgcgccacccgccgagcccgtggacggcggcggctcgcaggccgtg
aaggcgcagctgcggctgcgcgaaatgatcctggccggcgaactgcccggcggtgcacgc
attgccgaggtggccatctccgagcagctcggcgtgtcgcgcacgccggtgcgcagcgcg
ctcatgcggctcgaacaggaaggcctgctcgaggcgctgcccaacggcggctacgcggtg
cgcactttttccgagcgcgacgtggccgatgccatcgagctgcgcggcacgctcgaaggc
ctggtggcgcggctcgcggccgagcgcggcgcggcgccggtggtgctgcgcgaggcgcgc
gcctgcctggcacgcatcgacgaactgctgcgcgagcccgcgctagacgacgcggccttc
tcgcgctacgtgacgcacaacgagaagttccattcgctgctgtgcgaaatggcggccagt
ccggtgattgcgcagcagctcgagcgcgtggtcaacctgccgttcgcgtcgccctcgggc
ttcgtcatcgtgcaggccaattcgcccgccgcgcgcgacatgctcgtgatcgcacaggac
cagcatctgcaggtgctcgatgccatcgaagccggcgaaggctcgcgcgccgaggcgctg
atgcgcgagcacagccgcctcgcacggcgcaacctgcgcgaggcgctgcatggcacgccc
agcgccgagcagcgcccgctgcccggcgtgcagttgatccgccggcgcggctga
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