Variovorax paradoxus B4: VAPA_1c18340
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Entry
VAPA_1c18340 CDS
T02835
Name
(GenBank) putative ABC transporter, branched-chain amino acid-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c18340
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c18340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c18340
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c18340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
LppC
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
AGU48942
UniProt:
T1X7M7
LinkDB
All DBs
Position
1:1966230..1967405
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AA seq
391 aa
AA seq
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MQRRHLIQTAGLTALALSMSLATAQDSNKFKIGLILPMTGQQASTGRQIEAAARLYMAQN
GDTVAGKKIELIVKDDVATPDVTKRLAQELIVNDKVNVIAGFGVTPAALAAAPLATQSKT
PQVVMAAATSSITEASPYIVRTSFTLPQVSVAMGDWAPKNGVKTVVTLVADYGPGNDAEK
FFSERFQLNGGKVIEKLRVPLRNPDFAPFLQKVRDAKPDALFVFVPSGAGAAVMKQFLER
GMDKAGIRMIATGDVTDDDQLNDMGEGALGVVTSHHYSAAHPSAANKKFVEAFQKANPKM
RPNFMAVGGYDGMRVIYEALKATKGQGGGDALLAAMKGQIFESPRGPVYIDAQTRDIVQD
VYLRKVEKKDGQLYNVEFDVIKGVKDPGKAK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacgtcacctcatccagaccgcaggcctcacggcgcttgcgctttccatgtcg
cttgccactgcgcaggacagcaacaagttcaagatcggcctgatcctgccgatgacgggg
cagcaggcgtccaccggccggcagatcgaagcggcggcccggctgtacatggcgcagaac
ggcgacaccgtcgcgggcaagaagatcgagctgatcgtcaaggacgacgtggccacgccc
gacgtcaccaagcgcctcgcgcaggaactgatcgtcaacgacaaggtgaacgtgatcgcg
ggcttcggcgtcacgccggccgcactggccgccgcgccgctggccacgcagtcgaagacg
ccgcaggtggtgatggctgcggccacttccagcatcactgaggcctcgccctacatcgtg
cgtacgagcttcacgctgccgcaggtgtcggtggccatgggcgactgggcgcccaagaac
ggcgtgaagacggtggtcacgctggtggccgactacggcccgggcaacgacgccgagaag
ttcttcagcgagcgcttccagctcaacggcggcaaggtgatcgagaagctgcgcgtgccg
ctgcgcaaccccgatttcgcgccgttcctgcagaaggtgcgcgacgccaagcccgacgcg
ctgttcgtcttcgttccctcgggtgcgggtgcggccgtgatgaagcagttcctcgagcgc
ggcatggacaaggccggcatccgcatgatcgccaccggcgacgtgaccgacgacgaccag
ctcaacgacatgggcgagggcgcgctgggcgtggtcacctcgcaccactactcggccgcg
catccgtcggccgcgaacaagaagttcgtcgaggctttccagaaggccaacccgaagatg
cgccccaacttcatggccgtgggcggctatgacggcatgcgcgtgatctacgaagcgctc
aaggccaccaaggggcagggcggcggcgacgcgctgctggccgccatgaagggccagatc
ttcgagagcccgcgcggcccggtgtacatcgacgcgcagacgcgcgacatcgtgcaggac
gtgtacctgcgcaaggtcgagaagaaggacggccagctctacaacgtcgagttcgacgtg
atcaagggcgtgaaggatccgggcaaggcaaagtga
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