Variovorax paradoxus B4: VAPA_1c18760
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Entry
VAPA_1c18760 CDS
T02835
Name
(GenBank) putative PpiC-type peptidyl-prolyl cis-trans isomerase
KO
K03770
peptidyl-prolyl cis-trans isomerase D [EC:
5.2.1.8
]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vpd03110
]
VAPA_1c18760
Enzymes [BR:
vpd01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
VAPA_1c18760
Chaperones and folding catalysts [BR:
vpd03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
VAPA_1c18760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SurA_N_3
Rotamase_3
Rotamase_2
Rotamase
SurA_N_2
SurA_N
Motif
Other DBs
NCBI-ProteinID:
AGU48983
UniProt:
T1X8V8
LinkDB
All DBs
Position
1:2009571..2011481
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AA seq
636 aa
AA seq
DB search
MFDFFRRYNKIVMIFLFLLIIPSFVLFGVDRYQGSGGEVKVARVDGQAITRPEWDAQHRL
ETDRIRQQSPNVDPTLLESDVMRYATLERMVRDRVLAAAAAKANVTISEERLSRIFAQDT
GLAAFRTPDGKFDRESFQRVTGRTPEQYEASMRAELATQQMLLGISGTAFTPPALAAATI
NAFYDRREIQVARFSPESFASKVTVSDADVETYYKDHAAQFQAPEQASIEYLVLDLEAAK
KNISVNEADLKSYYEQNTARFGAKEERRASHILITAPASASAADRAKAKAKAEQLLAEVK
KAPATFADVARKNSQDPGSAEKGGDLDFVTRGAMVKPFEDAMFALKKGDISDVVETEFGY
HIIRLADIKPAVVPPFEQVRATIENEVRAQQATQEFAKAAETFTDAVYQQPDSLKPAAEK
LKLTIQTASSVARTPAPGATGVLANRNFLSALFAADSLDRKQNTEAIEVGSNQLAAGRVT
QYTPAHPMPLAEVKDKIRAQLVTERAAVMAKAEGEAKLAAWTAKADGATFGAPVTVSRRE
AQAQPIAVIDAALRADAAKLPALVGVDLGTQGYAVVRVTKVVPRTPSTPEQTQQENAQVG
QSVTAAEEVAYYNLLKERFKAEIIVPKPADTLPVAR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatttcttccgcaggtacaacaagatcgtcatgattttcttgttcttgctgatc
attccctcgttcgtcctctttggcgtggatcgctatcagggctccggcggcgaagtgaag
gtagcgcgggtcgacggccaggccatcacccggcccgagtgggatgcacagcaccgcctc
gaaaccgaccgcatccgccagcaatcgcccaacgtcgatccgacgctgctcgaatccgac
gtgatgcgctatgccacgctggagcgcatggtgcgcgatcgcgtgctggccgctgcggca
gccaaggccaacgtgacgatctccgaagagcggctgtcacggatctttgcgcaggacacg
ggtcttgcggcgttccgcacgccggacggcaagttcgaccgcgagagcttccagcgcgtc
accgggcgcactccggagcagtacgaggcgtcgatgcgcgccgaactggccacgcagcag
atgctgctgggcatctcgggcacggcgttcacgccgcccgcgctggctgcggcaaccatc
aatgccttctacgaccgccgcgagatccaggtcgcgcgcttcagccccgagagcttcgcg
tcgaaggtgacggtcagcgatgccgacgtcgaaacctactacaaggaccatgcggcgcag
ttccaggctcccgagcaggccagcatcgaatacctcgtgctcgacctcgaggcggccaag
aagaacatctcggtgaacgaggccgatctcaagagctactacgaacagaacacggcgcgc
ttcggcgccaaggaagagcgtcgcgccagccacatcctgatcaccgcgccggcgagcgca
tcggcagccgaccgcgccaaagccaaggccaaggcggagcagttgctcgccgaagtgaag
aaggcgcccgccaccttcgccgacgtcgcgcgcaagaattcgcaagatcccggatcggcg
gagaagggcggcgacctcgacttcgtgacgcgcggcgcgatggtcaagcctttcgaagac
gcgatgttcgcgctcaagaagggtgacatcagcgacgtggtcgagaccgagttcggctat
cacatcattcgcctcgccgacatcaagccggccgtggtgccgcctttcgagcaggtgcgc
gccaccatcgaaaacgaggttcgcgcgcagcaggcgacgcaggaattcgcgaaggccgcg
gagaccttcaccgatgcggtctaccagcagcccgacagcctcaagccggcggcagaaaaa
ctgaagctcacgatccagacggcaagcagcgtcgcacgcaccccggccccgggtgccacc
ggcgtgctggcgaaccgcaatttcctgagcgcgctgttcgcggccgattcgctggaccgc
aagcagaacaccgaagcgatcgaagtcggttccaaccagctcgcggcaggccgcgtgacg
cagtacacgcccgcgcatccgatgcccctggccgaagtcaaggacaagatccgcgcgcag
ctcgtcaccgagcgtgccgccgtcatggccaaggcagagggcgaagccaagctcgccgcc
tggaccgccaaggccgacggcgccaccttcggcgcgccggtcacggtttcgcggcgcgaa
gcgcaggcccagcccattgcggtcatcgacgccgcgctgcgcgccgatgcggccaagctg
cccgcgctggtgggcgtggatctgggcacgcaaggctatgcggtggttcgcgtgaccaag
gtcgttccgcgcacgccgtcgacgcccgagcaaacgcagcaggagaacgcgcaggtcggc
cagtcggtgaccgcggcggaagaagttgcgtactacaacctgctgaaggaacgcttcaag
gccgagatcatcgtgccgaagccagcggatacgctgcctgtggcccgctga
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