Variovorax paradoxus B4: VAPA_1c18860
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Entry
VAPA_1c18860 CDS
T02835
Name
(GenBank) putative LysM domain-containing peptidase, M23 family
KO
K06194
lipoprotein NlpD
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
VAPA_1c18860
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
Biotin_lipoyl_2
RnfC_N
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
AGU48992
UniProt:
T1X7S6
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Position
1:2017257..2018150
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AA seq
297 aa
AA seq
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MQGFGNRSWCAGITLAVVLVIAGCAAPRGPAPVEDRGTMTRAPNAAPGGPLITTDASGKP
LPGIENYGKPGYYAVRPGDTIRRIGNETGQSWQNIVRWNNLENPDLIEVGQVLRVVPPVG
PATAVATAPAPSFEGAVTKPVTPPSVVVPAAPASAAVGKPPVTASPSAPAASSGDEDLGW
IWPAHGTLLAGFDDAKNKGFDIGGKAGDAVLAAADGRVVYAGAGLRGYGNLIILKHNNTY
LTAYAHNQTLLVKEDQSVQKGQKIAEMGNSDADRVKLHFEIRRQGKPVDPARYLPSR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttttggcaatcggagttggtgcgctggtatcacgttggcagttgtgctcgtg
atcgcgggctgcgccgcaccgcgagggccggcaccggtcgaagaccgcggcacgatgacg
cgtgcgcccaatgcggcacccggtggcccgctcatcaccaccgacgcctcgggcaagccg
cttccaggcatcgagaactatggcaagccgggttattacgcagtgcggcccggcgacacg
atccgccgcatcggaaacgaaacaggccagagctggcagaacatcgttcgctggaacaat
cttgaaaatcccgacctgatcgaagtcggccaggtgctgcgcgtggtgccgccggtgggg
ccggccaccgctgtcgcaaccgcgcctgccccttctttcgagggtgcggtgaccaagccc
gtcacgccgccgtcggtggtggtgcccgccgcgcccgcgagtgccgcggtcggcaagccg
ccggtcacggcgtcgccgtcggcgcccgcagcaagctcgggcgacgaggacctcggctgg
atctggccggcgcacggcacgctcctcgcggggttcgacgatgccaagaacaagggcttc
gacatcggcggcaaggcgggcgacgccgtcctcgcggctgccgacggccgcgtggtctat
gccggcgcaggtttgcgcggctatggcaacctgatcatcctgaagcacaacaacacctac
ctcacggcctatgcgcacaaccagacgctgctcgtgaaggaagaccagtcggtgcaaaag
ggccagaagatcgccgagatgggcaacagcgacgctgaccgcgtcaagctgcatttcgaa
atccgccgccagggcaagcctgtcgatccggcgcgctacttgccgagccggtaa
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