Variovorax paradoxus B4: VAPA_1c19270
Help
Entry
VAPA_1c19270 CDS
T02835
Symbol
livF
Name
(GenBank) putative high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c19270 (livF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c19270 (livF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c19270 (livF)
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c19270 (livF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_30
SMC_N
AAA_27
AAA_22
AAA_23
RsgA_GTPase
MeaB
AAA_16
BCA_ABC_TP_C
MukB
Motif
Other DBs
NCBI-ProteinID:
AGU49033
UniProt:
T1X913
LinkDB
All DBs
Position
1:complement(2054867..2055694)
Genome browser
AA seq
275 aa
AA seq
DB search
MDARAAPDLVLEVNNLEVVYNKVVQVLRGLSLTVPRGQIVALLGSNGAGKSTTLKAVSGL
LALEDGEVEAGRIVFDGAPTAQLAPQQLVRRGLSHVMEGRRVFEDLTVEENLIAATYALT
GRDGPAPPRNFDDVYAYFPRLHERRKGLAGYLSGGEQQMLAIGRALVAQPKLILLDEPSL
GLSPKLVEDIFTIIARINAERGTSMLLVEQNASVALAIAHTGYIMESGKVVIDGSAERLA
ADPDVREFYLGVGGSGESRSFRALKHYKRRKRWLS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcgcgcggcacccgacctcgtgctggaggtcaacaacctcgaggtggtgtac
aacaaggtcgtgcaggtgctgcgcggcctgtcgctgaccgtgccgcgcgggcagatcgtg
gcgctcctgggcagcaatggcgcgggcaagtcgaccacgctgaaggcggtgtcgggcctg
ctcgcgctggaggacggtgaggtggaggcgggccgcatcgtgttcgatggcgcgccgacc
gcacagctggcgccgcagcaactcgtgcggcgcggcctgagccatgtgatggaaggccgg
cgcgtgttcgaggacctgacggtcgaggagaacctgatcgccgcgacctatgcgctcacc
gggcgtgacggccccgcgccgccgcgcaatttcgacgacgtctacgcgtacttcccccgc
ctgcacgaacgccgcaaaggcctcgcgggctatctctcgggcggcgagcagcagatgctg
gccatcggccgcgcgctggtggctcaacccaagctcatcctgctcgacgagccctccctc
ggcctctcgcccaagctggtggaagacatcttcacgatcatcgcgcgcatcaatgccgaa
cgcggcacctcgatgctgctggtggaacagaacgcgagcgtggcactggccattgcccac
acgggctacatcatggaaagcggcaaggtggtgatcgacggcagcgccgagcggctcgcg
gccgaccccgacgtgcgcgagttctacctgggcgtgggcggcagcggcgagtcgcgcagc
ttccgcgcgctcaagcactacaagcgccgcaagcgctggctctcatga
DBGET
integrated database retrieval system
