Variovorax paradoxus B4: VAPA_1c19280
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Entry
VAPA_1c19280 CDS
T02835
Name
(GenBank) putative amino acid-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c19280
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c19280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c19280
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c19280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
AGU49034
UniProt:
T1X9N1
LinkDB
All DBs
Position
1:complement(2055694..2056884)
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AA seq
396 aa
AA seq
DB search
MPKTPKLSHHRRALLIAAGLSASLAAVSLANAQGNEDIVIGGSIPMTGVFAFAGVGINAG
IADYVKIVNDAGGIKGRKLRYVPEDTGYKVDVSVAAFKKITSQNKVNLYYGDSTGFSKTI
NPELERNGQILMAGASFATELNDSAKYPNQFLVGPDYTEQIGILLRHIAKEKPGAKVAFV
YSDSEFGRDPIEASEAAAKKLGLTVPVKLMTPPGSVDVSTEVIKLRRAAPDYTIFHGYIL
APIPEFVQQGKQMGMTSKWMGTFWTMDSSTVMKMGEGADGFMGVMPYRYYYDTSAKTPML
DKIRALRPEYQSTAYTQGFLTAMLFTEAAKRTLDAGKPLDGKNLKASLNTIKDFDTGGLI
GMPITIKGNSIPVGRVYKADMKAQKMVPASDWISLN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagacaccgaagctttcccaccatcgccgcgccctgctgatcgcggccggcctc
tccgccagcctcgccgccgtgtcgctcgcgaatgcgcaaggcaatgaggacatcgtcatc
ggcggctccattccgatgaccggcgtgttcgccttcgcaggcgtcggcatcaacgccggc
attgccgactacgtgaagatcgtcaacgacgcgggtggcatcaaggggcgcaagctgcgc
tatgtgccggaagacacgggctacaaggtcgacgtgtcggtggcggccttcaagaagatc
acgagccagaacaaggtcaacctctactacggcgactcgaccggcttctccaagaccatc
aaccccgagctcgaacgaaacggacagatcctcatggccggcgcttcgtttgccaccgaa
ctcaacgactcggccaagtacccgaaccagttcctggtcggccccgactacaccgagcag
atcggcatcctgctgcgccacatcgccaaggaaaagccgggcgcgaaggtggccttcgtg
tattccgattccgaattcggccgcgacccgatcgaagccagcgaagccgccgccaagaag
ctgggcctcaccgtgccggtcaagctcatgactccgccgggcagcgtcgacgtgtcgacc
gaagtcatcaagctgcgccgcgccgcacccgactacaccatcttccacggctacatcctc
gcgcccatcccggagttcgtgcagcagggcaagcagatgggcatgaccagcaagtggatg
ggcaccttctggaccatggacagctccaccgtcatgaagatgggcgaaggcgccgatggc
ttcatgggcgtgatgccctaccgctactactacgacacctcggccaagacgccgatgctc
gacaagatccgcgcgctgcgccccgagtaccagagcacggcctacacgcagggctttctc
acggcgatgctgttcaccgaagcggccaagcgcacgctggatgcgggcaagccgctggac
ggcaagaacctgaaggcctcgctcaacaccatcaaggacttcgacaccggcgggctcatc
ggcatgccgatcacgatcaaaggcaactcgattcccgtgggccgcgtctacaaggccgac
atgaaggcgcagaagatggtgccggcgtcggactggatctcgctgaactga
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