Variovorax paradoxus B4: VAPA_1c19320
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Entry
VAPA_1c19320 CDS
T02835
Name
(GenBank) transcriptional regulator, TetR family
Organism
vpd
Variovorax paradoxus B4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
TetR_C_41
TetR_C_11
HTH_22
HTH_17
HTH_Tnp_1_2
HTH_10
TetR_C_13
TetR_C_7
HTH_24
HTH_11
TetR_C_9
TetR_C_27
HTH_20
MerR
HTH_7
HTH_23
Sigma70_r4_2
Phage_terminase
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AGU49038
UniProt:
T1X917
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All DBs
Position
1:2059817..2060500
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AA seq
227 aa
AA seq
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MAPPALSPSIPPSPWEPAGRRAQQREVKRNAVLQTAAQLFNERGFHATSLDDIAERLNVS
KPTLYYYVESKDQILLECVKTALDLMQAGIGEVRAAGGSAIDQLKACMRIYSGVVTQDFG
MCVIRIGEDPLPDPLKKELRRLKAGIDGQFRRLIEDGVAEGSLAPCDPKMAAFMLAGALS
WIGRWYRPDGELTPDQIADQGIDLLLNGVLHRPVAARRKPAAAKAKR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggcccctccagccctcagcccatccattcctccttctccgtgggagcctgccggcagg
cgcgcgcagcagcgcgaggtcaagcgcaacgccgtgctccagacggcggcgcagcttttc
aacgagcgcggcttccatgccacgtcgctcgacgacattgccgagcggctcaacgtcagc
aagcccacgctctactactacgtcgagagcaaggaccagatcctgctggagtgcgtgaag
accgcgctcgacctgatgcaggccggcatcggcgaggtgcgcgccgcgggcggcagcgcc
atcgaccagctcaaggcctgcatgcgcatctattcgggcgtggtcacgcaggacttcggc
atgtgcgtgatccgcatcggcgaagacccgctgcccgatccgctcaagaaggaactgcgc
cgcctcaaggccggcatcgacgggcagttccgtcggctcatcgaggatggcgtggccgaa
ggctcgctcgcgccctgcgacccgaagatggccgccttcatgctggccggtgcgctgagc
tggatcggccggtggtaccgccccgacggcgagctgacgcccgaccagatcgccgaccag
ggcatcgatctgctgttgaatggcgtgctgcatcgccccgtcgcggcgcgccgcaagcct
gcggcggcgaaagcaaagcgatga
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