Variovorax paradoxus B4: VAPA_1c19700
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Entry
VAPA_1c19700 CDS
T02835
Symbol
pheT
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VAPA_1c19700 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpd01007
]
VAPA_1c19700 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpd03016
]
VAPA_1c19700 (pheT)
Enzymes [BR:
vpd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
VAPA_1c19700 (pheT)
Amino acid related enzymes [BR:
vpd01007
]
Aminoacyl-tRNA synthetase
Class II (U)
VAPA_1c19700 (pheT)
Transfer RNA biogenesis [BR:
vpd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VAPA_1c19700 (pheT)
Prokaryotic type
VAPA_1c19700 (pheT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B3_4
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
AGU49076
UniProt:
T1X9E1
LinkDB
All DBs
Position
1:2095365..2097806
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AA seq
813 aa
AA seq
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MQFPESWLREFCNPPFGSAELAETLTMGGFEVEERRPVAPPFTRIVVGEIKEAVQHPNAD
RLRVCQVDAGQGALLNIVCGAPNARVGIKVPCALVGAELPPGEDGKPFLIKLGKLRGVES
QGMLCSARELKLSEDHGGLLELDADAPIGADVRDVLKLDDALLTLKLTPNLAHGLSVYGV
ARELAALTGAPLRTPAIAPVAASFADVLPVKVEAPELCGRFSGRIVRGVNTKVATPAWMV
DRLARCGQRSVTPLVDISNYVMFEYGQPSHIFDLDKIHGGLTVRWGKAGEQLKLLNGNTI
GVDDKVGVIADDQAVESLAGIMGGDATSVSDDTRNIYVEAAFWWPEAVQGRSRRFNFSTD
AGHRYERGVDPSRTVEIIERITQLVIEICGGQAGAMDDKILNVPEAMPVTLRVARAARVI
GMPLTQAQCADALRRLGFALREGEGTLTVTPPPHRFDLLIEEDLIEEVARLIGFNNLPTN
APLAPITARVRPEAQRSRFAVRRSLAALGYQETINFSFVEAHWEQDLAGNANPVKLLNPI
ASQMSVMRSSLLGSLLQVLKFNLDRKAPRVRVFEVGRVFMRDDSVATTDSTVRGVDQPMR
VAGLAWGDAEEARWDGKAQRVDFYDAKGDVEALLAPRVPSFEPAEHPALHPGRSARVMVD
GKAIGFIGELHPRWRQKWDFALAPVLFELDLDAVTARPVPVARPVPRHQAVERDIAVVVA
EAVTHNALMQAIQSAAAAQGLLRDATLFDIYRPQPARDGAVPASGGLAQGEKSMAVRLSF
QDDSATLTDEQVEPAVRAIVEQLSAKLGARLRG
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcccggaatcctggctgcgcgagttctgcaatccgcccttcggcagcgccgaa
ctggccgaaacgctcaccatgggcggcttcgaggtcgaagagcgccgccccgtggcgccg
ccctttacccgcatcgtggtcggcgagatcaaggaagccgtgcagcaccccaacgccgat
cgcctgcgcgtgtgccaggtcgacgccgggcagggcgccttgctcaacatcgtgtgcggc
gcacccaatgcgcgcgtcggcatcaaggtgccctgcgcgctggtcggcgccgaactgccg
cccggtgaagacggcaagccctttctcatcaagctcggcaagctgcgcggcgtggaaagc
cagggcatgctgtgctcggcccgcgaactgaagctcagcgaagaccacggcggcctgctc
gaactcgatgccgacgcacccattggcgccgacgtgcgcgacgtgctcaagctcgacgac
gcgctgctcacgctcaagctcacgcccaacctcgcgcatggcctgagcgtctatggcgtt
gcgcgcgagctcgcggcactgaccggtgcgccgctcaggacgcccgccatcgcgccggtg
gcggcatcgtttgccgacgtgttgccggtgaaggtggaagcgcccgaactctgcggccgc
ttctcggggcgcatcgtgcgcggcgtgaacaccaaggtggccacgccggcctggatggtc
gatcgcctcgcgcgctgcggccagcgcagcgtgacgccgctggtcgacatctcgaactac
gtcatgttcgagtacggccagcccagccacatcttcgacctcgacaagattcatggcggc
ctcacggtgcgctggggcaaggcgggcgagcagctcaagctgctcaacggcaacaccatc
ggcgtcgacgacaaggtcggcgtgattgccgacgaccaggccgtcgaatcgctcgcgggc
atcatgggcggcgatgccacctcggtgtccgacgacacgcgcaacatctacgtggaggcc
gcgttctggtggcccgaagccgttcagggccgctcgcgccgcttcaacttctcgaccgat
gcggggcatcgctacgagcgcggcgtcgatccgagccgcacggtggaaatcatcgagcgc
atcacgcagctggtcatcgagatctgcggcggccaggccggcgccatggacgacaagatc
ctgaacgtgcccgaggccatgcccgtcacgctgcgcgtggcgcgtgccgcgcgcgtcatt
ggcatgccgctcacgcaggcgcaatgcgccgacgcgctgcgccgcctcggctttgcgttg
cgcgaaggcgagggcacgttgaccgtcacgccgccgccgcatcgcttcgacctgctgatc
gaggaagacctgatcgaagaggtcgcgcgcctgatcggcttcaacaacctgccgaccaat
gcgccgctggcgcccatcaccgcgcgcgtgcggcccgaggcccagcgcagccgcttcgcg
gtgcgccgcagcctggcggccctcggctaccaggaaaccatcaacttcagcttcgtcgag
gcgcactgggagcaagacctggccggcaatgccaatccggtgaagctcctcaaccccatt
gccagccagatgagcgtgatgcgctcgtccttgctgggctcgctgctgcaggtgctcaag
ttcaacctcgatcgcaaggcgccccgcgtgcgcgtgttcgaggtgggccgtgtgttcatg
cgcgacgacagcgtggccaccaccgacagcaccgtgcgcggcgtcgaccagcccatgcgc
gtggccggcctcgcctggggcgatgcggaagaggcgcgctgggacggcaaggcgcagcgc
gtcgatttctacgatgccaagggcgacgtcgaagcgctgctcgcgccgcgggtgccgagc
ttcgagccggcggagcatccggccctgcaccccggccgctcggcgcgcgtgatggtcgac
ggcaaggccatcggcttcatcggcgaactgcatccgcgctggcgccagaagtgggacttc
gcgctggcgccggtgctgttcgagctcgacctcgatgccgtcaccgcgcgccccgtgccc
gtggcgcggccggtgcccaggcaccaggcggtggagcgcgatattgcggtggtggtggcc
gaagccgtcacgcacaatgcgttgatgcaggccattcaatcggcggcagcggcgcaaggg
ctgctgcgcgacgccacgctgttcgacatctatcgtccgcagcctgcgcgcgacggtgcg
gtgccggcatcgggcggactggcgcaaggcgaaaagagcatggcggttcgcctgagcttc
caggacgacagcgccacgctcaccgacgagcaggtggaaccggccgtgcgcgccatcgtc
gaacaattgagcgccaagctcggcgcacgcctgagaggttga
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