Variovorax paradoxus B4: VAPA_1c20630
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Entry
VAPA_1c20630 CDS
T02835
Name
(GenBank) putative NAD-dependent epimerase/dehydratase
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00523
Polyketide sugar unit biosynthesis
vpd01110
Biosynthesis of secondary metabolites
vpd01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VAPA_1c20630
Enzymes [BR:
vpd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
VAPA_1c20630
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
KR
Pyr_redox
adh_short
DAO
NmrA
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AGU49167
UniProt:
T1X8C0
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Position
1:2182086..2183219
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AA seq
377 aa
AA seq
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MNILISGGAGFIGSALAIALVSRGDQVTVLDNLSPQIHGEDPQSSALVRRLPSSVRLIQG
DVRSREDWANALSGQNVVIHLAAETGTGQSMYEIDRYVDVNIRGTSLLLDILAKKEAGSE
TVRRLVVASSRAIYGEGKYKGRNSYVYPGARDPGDLSNGIFDCRDPESGDIAVAVPTDED
SKIHPSSIYGITKQVQEQLILTGGASLGIPSVALRYQNVYGPGQSLKNPYTGILSIFSTL
LLQGKDINIFEDGKETRDFVYIDDVVSATLAAIDADVSGAAYNVGTGQATDVLSVAQALR
ANYGSDGEIKVTGNFRVGDIRHNFADLTRAKSDLGFVPAVDFAHGVKAFADWVQTQEVSD
SGYERSVSEMRSKGLLK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcttgatttcaggcggtgccggctttatcggcagcgcattggcgatcgccttg
gttagcagaggcgatcaggtcaccgtactcgacaacctttcgcctcaaattcacggtgaa
gatccgcagtcatctgccttggtacggcgtctgccttcctcggtgcgcttgattcaggga
gacgttcgaagtcgcgaagactgggcgaatgctttgtctggtcaaaacgtcgtcatacac
ctggcagcggaaaccggcacagggcaatcgatgtacgagatcgatcgctacgtggatgtc
aacattcgcggcacgtcgctgctactcgacatcctcgccaagaaagaagccggtagtgaa
accgtccggcggctcgtcgtggcttcctcccgcgcgatctatggcgagggaaagtacaaa
ggccgcaacagctacgtctatcccggcgcacgcgatccgggcgatctgagcaatggcatc
tttgactgccgggatccggaaagcggcgacatcgcagtagccgttcctaccgacgaagat
tcgaagatccatcccagttccatctacggcatcaccaagcaggtgcaagaacaattgata
ctcactggtggtgccagtctcggtatccccagtgtggcactgcgctatcagaacgtgtat
gggccaggccagtctctgaagaatccgtataccggcatcctctcgatcttctcgactctg
ctccttcagggcaaagacatcaatattttcgaggatggcaaggaaacccgcgacttcgtc
tacatcgacgacgtggtcagcgccactcttgccgccatcgatgccgatgtgagcggcgcc
gcctacaacgttggcaccggccaggccaccgacgtgttgagcgtcgcgcaggcgctgaga
gccaactacggcagcgacggcgaaatcaaagttaccggcaactttcgcgtgggcgacatc
cgccacaactttgccgatctgactcgggctaagtccgaccttggcttcgtgccagcagtg
gactttgcccatggtgtgaaggcgtttgctgactgggtgcaaacccaggaagtcagcgat
tcaggctacgagcgatccgtcagcgagatgcgtagcaaggggctgctgaagtga
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