Variovorax paradoxus B4: VAPA_1c20820
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Entry
VAPA_1c20820 CDS
T02835
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c20820
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VAPA_1c20820
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GFIT
Motif
Pfam:
Peripla_BP_4
LacI
Peripla_BP_1
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AGU49186
UniProt:
T1X9N7
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All DBs
Position
1:2205504..2206559
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AA seq
351 aa
AA seq
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MRDNPSPPSDARRARVVDIARAAQVSTATVDRVLNRRPGVRDATVQRVLKAAGELDYLPG
PELYAALTPPPLRLVFLLPAGTNRFIRMLGDMVGYSQEHWAPFNVQCRTVFIESFNPHEL
ADALRRHGQRCDGIAMMALEHPAVREAVAALAARGLPVVTLISDLSNSERAAFVGLDNRA
AGRTAGYLIGRFIGARAAKVALIAGSLSYKAHEEREAGFLHVIDEMFPRLEVVGLREGQD
DAGKNYRQTRALLEQYPDMGGIYNIGGASDGVARALKEAGREQKVVFIGHGLTPDTRTLL
IDGSMDAVITQSPHTTLMSCVRIFANLRDGREALSGVETTRSQVIFRENLP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgggataacccttcacctccttccgatgcgcggcgcgcgcgcgtggtcgacatcgcc
cgcgcggcgcaggtgtccaccgccaccgtcgaccgcgtgctcaaccgccgccccggcgtg
cgcgatgccacggtgcagcgcgtgctcaaggccgcgggcgagctcgactacctgccgggc
cccgagctctatgccgcgctcacgccgccgcccctccggctggtgttcctgctgccggcc
ggcaccaaccgcttcatccgcatgttgggcgacatggtgggctattcgcaggagcactgg
gcgccgttcaacgtgcagtgccgcacggtgttcatcgagagcttcaatccgcacgagctg
gcggacgcgctgcggcgccatggccagcgctgcgacggcatcgcgatgatggcgctggag
caccccgcggtgcgcgaggccgtggcggcgctggctgcgcgcgggctgccggtggtcacg
ctgatctcggacctgtcgaactcggagcgcgccgccttcgtggggctggacaaccgcgcg
gccggccgcaccgcgggctacctcatcggccgcttcatcggcgcgcgcgccgcgaaggtg
gcgctcatcgcgggcagcctgagctacaaggcgcacgaggagcgcgaggccggcttcctg
cacgtgatcgacgagatgttcccgcggctcgaggtggtgggcctgcgcgaaggccaggac
gatgcgggcaagaactaccggcagacgcgcgcgctgctggagcaataccccgacatgggc
ggcatctacaacatcggcggcgcgtccgacggcgtggcgcgggcgctgaaggaggcgggg
cgcgagcagaaggtggtgttcatcgggcacggactcacgcccgacacgcgcacgctgctg
atcgacggcagcatggacgcggtgatcacgcagagcccgcacaccacgctgatgagctgc
gtgcgcatctttgccaacctgcgcgacgggcgcgaggcgctcagcggcgtggaaaccacc
cgcagccaggtgatcttccgcgagaacctgccgtag
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