Variovorax paradoxus B4: VAPA_1c20840
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Entry
VAPA_1c20840 CDS
T02835
Symbol
gabD1
Name
(GenBank) succinate-semialdehyde dehydrogenase GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00250
Alanine, aspartate and glutamate metabolism
vpd00310
Lysine degradation
vpd00350
Tyrosine metabolism
vpd00650
Butanoate metabolism
vpd00760
Nicotinate and nicotinamide metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VAPA_1c20840 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VAPA_1c20840 (gabD1)
00310 Lysine degradation
VAPA_1c20840 (gabD1)
00350 Tyrosine metabolism
VAPA_1c20840 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
VAPA_1c20840 (gabD1)
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
VAPA_1c20840 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
VAPA_1c20840 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
VAPA_1c20840 (gabD1)
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Motif
Pfam:
Aldedh
VHP
Motif
Other DBs
NCBI-ProteinID:
AGU49188
UniProt:
T1X9G9
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All DBs
Position
1:complement(2207426..2208895)
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AA seq
489 aa
AA seq
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MPLTLTRPDLQRTANFIAGEWCSTDGRTLDVTDPATGALIAQVPDSGADAARAAADAAYA
ALPAWRRTPAKQRAQILKRWNDLVLAHQDDLGRLISREQGKPLAEGIGEVAYAASYIEWF
AEEATRANGDVIPAPVPGRRMFAIKEPVGVVAAITPWNFPAAMIARKIAPALAAGCTVVC
KPAEDTPLTSLALVALAAQAGVPAGVLNIVTASRERTPEVVDVWLDDARVRKITFTGSTP
VGKHLARRSADTLKKLSLELGGNAPFIVFEDADLHAAVDGLMAAKFRNGGQTCVCPNRVF
VHKAAHDEFAELLAARVSALRVGPASDPASQIGPMINARAIEKIERHVQDAVSRGARVLT
GGARLPALGPNYFAPTVLVNADATMACACEETFGPVVPLTRFADEADVVAQANDTPFGLA
AYFYSRDVRRIWRVADALEAGIVGINEGALAAEAAPFGGVKDSGYGREGSVHGLDDYLHT
KYVCQGQLD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgaccctcacccgccccgacctgcagcgcacggccaacttcatcgccggcgaa
tggtgcagcaccgacggccgcacgctggacgtgaccgaccccgccaccggcgcgctcatc
gcacaggtgcccgattccggcgcggacgcagcccgtgccgccgccgatgccgcgtatgcg
gcgctccccgcctggcgccgcacgccggccaagcagcgcgcacagatcctcaagcgctgg
aacgacctggtgctcgcgcatcaggacgacctcggccgcctgatctcacgcgaacagggc
aagccgctggccgaaggcatcggcgaggtcgcctacgcggccagctatatcgagtggttt
gccgaagaagccacgcgcgccaatggcgacgtgatccccgcgcccgttccgggccggcgc
atgttcgccatcaaggagccggtgggcgtggtggccgccatcacgccgtggaattttccg
gccgcgatgatcgcgcgcaagatcgcgccggcgcttgcggcgggctgcaccgtggtctgc
aagccggccgaggacacgccgctcacctcgctcgcgctggtggcgctggccgcgcaggcc
ggcgtgcccgcgggcgtgctcaacatcgtgacggcctcgcgcgagcgcacgcccgaagtg
gtcgatgtgtggctggacgatgcccgcgtgcgcaagatcaccttcaccgggtcgacgccg
gtcggcaagcacctggcgcgccgctcggccgacacgctcaagaagctgtcgctcgagctc
ggcggcaatgcgcccttcatcgtgttcgaggatgccgacctgcacgccgcggtcgacggc
ctgatggcggccaagttccgcaacggcggacagacctgcgtctgcccgaaccgcgtgttc
gtgcacaaggccgcgcatgatgaatttgccgaactgctcgcggcccgtgtttcggcgctg
cgcgtcggcccggccagcgaccccgcttcacagatcggcccgatgatcaatgcgcgcgcc
atcgagaagatcgaacgccatgtgcaggacgccgtttcgcgtggcgcgcgcgtgctcacc
ggcggcgcgcggctgcccgcgctggggccgaactacttcgcgcccaccgtgctcgtgaac
gccgacgccaccatggcctgcgcctgcgaggagaccttcggccccgtcgttccgctgacg
cgcttcgcggatgaggccgacgtggtggcccaggccaacgacacgcccttcggcctggcc
gcgtacttctactcgcgcgacgtgcgccgcatctggcgcgtggcggacgcactcgaagcc
ggcatcgtcggcatcaacgaaggcgccctggccgcggaggccgcgcccttcggcggcgtg
aaggattcaggctacggccgcgaaggctcggtccacggcctggacgactacctgcatacc
aaatacgtctgccagggccagctggactga
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