Variovorax paradoxus B4: VAPA_1c21590
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Entry
VAPA_1c21590 CDS
T02835
Name
(GenBank) putative serine/threonine-protein kinase, RIO1 family
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VAPA_1c21590
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vpd01001
]
VAPA_1c21590
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpd03009
]
VAPA_1c21590
Enzymes [BR:
vpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
VAPA_1c21590
Protein kinases [BR:
vpd01001
]
Serine/threonine kinases: Other
RIO family [OT]
VAPA_1c21590
Ribosome biogenesis [BR:
vpd03009
]
Eukaryotic type
Pre-40S particles
Kinases
VAPA_1c21590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
TCAD9
YrbL-PhoP_reg
APH
Motif
Other DBs
NCBI-ProteinID:
AGU49263
UniProt:
T1X9N9
LinkDB
All DBs
Position
1:complement(2282950..2283801)
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AA seq
283 aa
AA seq
DB search
MKAPPRLQSLVDEGLIDTVVRQLMSGKEAMVYVVRCGEETRCAKVYKEADKRSFRQAVDY
TENRRVRNSRETRAMAKGTRFGRQVTEAIWQSAEVDALYRLAAAGVRVPVPYNFLEGVLL
MELVTDANGDAAPRLNDVAFTREEAMQHHASLLKEVVRMLCAGVVHGDLSEFNVLLAADG
PVVIDLPQAVDAAGNNHAKRMLLRDVENLRNFFGQFAPELLGTHYGDEIWHLYERGLLRV
ESVLTGTHARDTGPVDLGNVLREVDDAREEEAARRLRMQLPRL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaccaccacgactgcagtcgctggtcgacgaaggcctgatcgacacggtggtc
cgccagctgatgagcggcaaggaagccatggtctacgtggtgcgctgcggcgaggagacg
cgctgcgccaaggtctacaaggaagccgacaagcgcagcttccgccaggccgtcgactac
accgagaaccgccgcgtgcgcaactcgcgcgagacgcgggccatggccaagggcacgcgc
ttcggccgccaggtgaccgaggccatctggcaaagcgccgaggtcgatgcgctctaccgc
ctggcggcggccggcgtgcgggtgcccgtgccctacaacttcctggaaggcgtgctgctg
atggagctggtgaccgacgccaacggcgatgcggcgccgcgcctgaacgacgtggcgttc
acgcgcgaggaggccatgcagcaccacgccagcctgctgaaggaagtggtgcgcatgctg
tgcgcgggcgtggtgcacggcgacctgtcggagttcaacgtgctgctggcagccgacggc
ccggtggtgatagacctgccgcaagcggtggatgcggcgggcaacaaccacgcaaagcgc
atgctgctgcgcgacgtggagaacctgcgcaacttcttcggccagttcgcgccggagctg
ctgggcacgcactacggcgacgagatctggcacctgtacgaacgcggcctgctgcgcgtc
gaatcggtgctgaccggcacgcatgcgcgcgacaccggccccgtcgacctgggcaacgtg
ctgcgcgaggtggacgacgcgcgcgaagaggaagcggcgcggcgcctgcgcatgcagctg
cccaggctctga
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