Variovorax paradoxus B4: VAPA_1c21750
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Entry
VAPA_1c21750 CDS
T02835
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c21750
03036 Chromosome and associated proteins [BR:
vpd03036
]
VAPA_1c21750
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
VAPA_1c21750
Chromosome and associated proteins [BR:
vpd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
VAPA_1c21750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
MarR
AsnC_trans_reg_3
HxlR
HTH_Crp_2
MarR_2
NirdL-like_HTH
Cas_Csd1
LexA_DNA_bind
HTH_20
TrmB
HTH_10
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AGU49279
UniProt:
T1XAD0
LinkDB
All DBs
Position
1:complement(2307039..2307476)
Genome browser
AA seq
145 aa
AA seq
DB search
MAILRVLLLDSRKTLQEIGKEVGLSPTSCWTRIKKLEAQGVIKRYTIDVDPAKLGYHDSV
IVQVTLESHTDETLYDFGRVLATIPEIQEAYLVSGDYDYYIRIAVRDTRDYERLLREKLY
KIPGIRHSKSHFVLRVLKETSVPVI
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggcgattctccgggtgctgctgctcgactcgcgcaagaccctgcaggagatcggcaag
gaggtcggcctgtcgcccaccagctgctggacgcgcatcaagaagctcgaagcccagggc
gtgatcaagcgctacaccatcgacgtggatccggccaagcttggctaccacgattcggtc
atcgtgcaggtcacgctcgaaagccacaccgacgaaacgctctacgacttcggccgcgtg
ctcgcaaccattccggagatccaggaggcctacctcgtatcgggcgactacgactactac
atccgcatcgcggtgcgcgacacgcgcgactacgagcggctgctgcgcgaaaagctctac
aagattcccggcatccgccacagcaagtcgcacttcgtgctgcgcgtgctgaaggagacc
agcgtgcccgtcatttga
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