Variovorax paradoxus B4: VAPA_1c21920
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Entry
VAPA_1c21920 CDS
T02835
Name
(GenBank) dihydrodipicolinate synthetase family protein
KO
K01714
4-hydroxy-tetrahydrodipicolinate synthase [EC:
4.3.3.7
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00261
Monobactam biosynthesis
vpd00300
Lysine biosynthesis
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01230
Biosynthesis of amino acids
Module
vpd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VAPA_1c21920
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
VAPA_1c21920
Enzymes [BR:
vpd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.7 4-hydroxy-tetrahydrodipicolinate synthase
VAPA_1c21920
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHDPS
ParB_C
DUF1843
PucR
Motif
Other DBs
NCBI-ProteinID:
AGU49296
UniProt:
T1X9Y7
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All DBs
Position
1:2330300..2331256
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AA seq
318 aa
AA seq
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MHISGVGGIWPATLTPFTPDGRVDDDALAAHVRDVAGTPGVRAVVVNGHAGEATSLDRAE
RTQVVRVAVAAAGEVPVVAGVVADDTRQACALARDAAQAGASALLLFPPAVFAQGAGARP
DMAHRFVSEVAAASSLPIVLFQLSRASGLAYSTDTLAQLCTDVPAIVAVKEGSDIPEFYE
DNLRALRALPRPVTLLSSSNSWLFASLAYGADGILSGLGSVAAGLLVALHEAVARGDLAA
ARAVNERLVPLCRAFYRAPYLDAHNRMKTALHLLGRLPHPDPRPPLLPVPADDTARIRAA
LLASGLLDAGHSSSFPSP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcacatttccggagtcggcggcatctggcccgccaccttgacccccttcacgccggac
ggccgcgtcgacgacgacgcgctggccgcccatgtgcgcgacgtcgccggcacgcccggc
gtgcgcgcggtggtggtcaacggacacgcgggcgaggcgacgtcgctcgatcgcgcggag
cgcacccaggtggtgcgggttgcggtggccgcggccggcgaagtgcccgtcgtggccggc
gtggtggccgacgacacccgccaagcctgcgcattggcgcgggacgcggcacaggccggc
gcctcggccttgctgctgtttccgccggcggtgttcgcgcagggcgcgggcgcgcgcccc
gacatggcccatcgcttcgtgagcgaggtggccgctgcgagcagcctgccgatcgtgctg
ttccagctgtcgcgcgcctcgggcctcgcctactcgaccgacacgctggcgcagctttgc
acggatgtgccggccatcgtggcggtgaaggagggcagcgacattcccgagttctacgag
gacaacctgcgggccctgcgcgcactgccacgcccggtcacgctgctgagcagcagcaac
agctggctgttcgcttcgctggcctatggcgcggacggcattctttcgggcctgggcagc
gtggctgccgggctgctggtggcgctgcacgaggccgtcgcgcgcggcgacctggcggcc
gcccgcgcggtcaacgagcggctggtgccgctgtgccgggccttctaccgcgcgccttac
ctcgacgcccacaaccgcatgaagacggcgctgcatcttctcggccgcctgccccatccg
gacccgcgcccaccgctcctgcccgtgccggccgacgacacggcgcgcattcgcgcggcg
ctgctggcctcaggcttgctggatgccggccactcttcttcttttccgtccccttga
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