Variovorax paradoxus B4: VAPA_1c21930
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Entry
VAPA_1c21930 CDS
T02835
Symbol
dapA2
Name
(GenBank) dihydrodipicolinate synthase DapA
KO
K01714
4-hydroxy-tetrahydrodipicolinate synthase [EC:
4.3.3.7
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00261
Monobactam biosynthesis
vpd00300
Lysine biosynthesis
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01230
Biosynthesis of amino acids
Module
vpd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VAPA_1c21930 (dapA2)
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
VAPA_1c21930 (dapA2)
Enzymes [BR:
vpd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.7 4-hydroxy-tetrahydrodipicolinate synthase
VAPA_1c21930 (dapA2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHDPS
Motif
Other DBs
NCBI-ProteinID:
AGU49297
UniProt:
T1X8N7
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All DBs
Position
1:2331269..2332162
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AA seq
297 aa
AA seq
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MADFRGTYTIMVTPFDAEGNVDVPTLERYVDWQIESGIHGLIPLGSTGEFMSMSDDEIAL
VARIVIDRAAGRVPVLIGTTAEDTRAAVRLSRRAEAQGADGVMVLPPFYCTPTDDELFLH
YRTISDAIGIPIMVYNNPAVANVDLKPPLVARLSQIDNCRYIKESTLEVTRVRDIMRLSE
GRMAVFGGIMGFESYVEGAVGWAAVPSNGAPREMARLYDLVMAGQLAEARALAFRHFPMI
DFVAGQSYVAGTKALLAAMGLPVGAPRPPRLPMGPEGIAAARRLVDELGLKIQTTTA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttccgcggcacctacaccatcatggtcacgcccttcgatgccgaaggcaac
gtcgacgtacccaccctcgaacgctatgtcgactggcagatcgaatccggcatccatggc
ctgatcccgctcggctcgacgggtgaattcatgtcgatgtccgacgacgagatcgcgctc
gtcgcccggatcgtgatcgaccgcgccgccggccgcgtgccggtgctcatcggcaccacc
gccgaggacacgcgcgccgccgtgcgcctgagccgccgcgccgaggcgcagggcgccgac
ggcgtgatggtgctgccgcctttctattgcacccccaccgacgacgagctgttcctgcac
tacaggaccatctcggacgccatcggcattccgatcatggtctacaacaacccggccgtc
gccaacgtcgacctgaagccgccgctggtggcgcggctctcgcagatcgacaactgccgc
tacatcaaggaatcgacgctcgaagtcacccgcgtgcgcgacatcatgcggctgtccgaa
ggccgcatggcggtgttcggcggcatcatgggcttcgagtcgtatgtcgagggcgcggtg
ggctgggccgccgtgccatcgaacggcgctccgcgcgaaatggcgcggctgtacgacctc
gtcatggccggccagctggccgaagcgcgcgcactggcgttcaggcactttccgatgatc
gacttcgtcgccggccagtcctacgtggcgggcaccaaggcactgctcgcggccatgggc
ctgccggtcggcgcgccgcgcccgccgcgcctgccgatgggccccgagggcatcgccgcc
gcgaggcgcctggtcgacgagctcggcctgaagattcaaaccaccaccgcctga
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