Variovorax paradoxus B4: VAPA_1c22040
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Entry
VAPA_1c22040 CDS
T02835
Symbol
selD
Name
(GenBank) selenide, water dikinase SelD
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00450
Selenocompound metabolism
vpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VAPA_1c22040 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpd03016
]
VAPA_1c22040 (selD)
Enzymes [BR:
vpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
VAPA_1c22040 (selD)
Transfer RNA biogenesis [BR:
vpd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VAPA_1c22040 (selD)
Prokaryotic type
VAPA_1c22040 (selD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
AGU49308
UniProt:
T1X9T2
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All DBs
Position
1:complement(2340620..2341693)
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AA seq
357 aa
AA seq
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MNAALPQAHTAEPRLTSLSHGGGCGCKIAPGVLSEILKGTARMPMPPELLVGIETADDAA
VYQLNDEQALIATTDFFMPIVDDPFDFGRIAATNAISDVYAMGGKPILALALVGMPINVL
STATIGRILEGGESVCRAAGIPIAGGHTIDSVEAIYGLVALGLVHPKRVKRNAGAKAGDV
LVLGKPLGVGILSAALKKEALDAAGYERMIATTTRLNTPGPELAALDGVHALTDVTGFGL
AGHALELARGASLSLEIDWKQVPVLEGVRDLVRSGHVTGASGRNWAGYGSDVALPQNFAD
HERALLTDPQTSGGLLVSCAPEALDQVLAIFHRHGFDAAAVVGRANPQGTGPRLVIR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagccctcccgcaagcccacaccgccgagccccgcctcacctcgctgtcgcac
ggcggcggctgcggctgcaagatcgcgcccggcgtgctgtcggaaatcctcaagggcacc
gcgcgcatgccgatgccgcccgagctgctggtcggcatcgagacggccgacgacgcggcc
gtctaccagctcaacgacgagcaggcgctgatcgccacgaccgacttcttcatgccgatc
gtcgacgatccgttcgacttcggccgcatcgcggccaccaacgcgatctccgacgtgtat
gcgatgggcggcaagccgatcctggcgctcgccctggtcggcatgccgatcaacgtgctc
agcacggcgaccatcgggcgcatcctcgaaggcggcgaatcggtgtgccgggctgctggc
attccgatcgcgggcggccacaccatcgattcggtcgaagccatctacggcctggtcgcg
ctggggctggtccatccgaagcgcgtcaagcgcaatgccggcgcgaaggccggcgacgtg
ctggtgctgggcaagccgctcggcgtgggcatcctgtcggcggcgctcaagaaagaagca
ctcgacgcggccggctacgaacgcatgatcgccaccacgacgcggctgaacacgccgggc
cccgagctcgcggcgctcgacggcgtgcatgcgctgaccgacgtgacgggcttcggcctg
gccggccatgcgctggaactggcgcgcggcgcgagcctgtcgctggagatcgactggaag
caggtgcccgtgctggagggggtgcgcgacctggtgcggtcggggcacgtcaccggcgct
tccggccgcaactgggccggctacgggtccgacgtggcgctgccgcagaacttcgccgac
cacgagcgcgccctgctcaccgaccctcagaccagtggcggactgctggtttcgtgcgcg
cccgaggcgctcgaccaggtgttggccatcttccatcggcatggcttcgacgccgccgca
gtggttggcagagccaacccgcaaggcaccgggccgcgcctggtgatccgctga
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