Variovorax paradoxus B4: VAPA_1c22160
Help
Entry
VAPA_1c22160 CDS
T02835
Name
(GenBank) transcriptional regulator, Crp family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02020
Two-component system
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VAPA_1c22160
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c22160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpd03000
]
VAPA_1c22160
Transcription factors [BR:
vpd03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
VAPA_1c22160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
MarR_2
HTH_24
TrmB
GntR
DprA_WH
MarR
Motif
Other DBs
NCBI-ProteinID:
AGU49320
UniProt:
T1XAW6
LinkDB
All DBs
Position
1:2352114..2352794
Genome browser
AA seq
226 aa
AA seq
DB search
MLPAKDLNAFFERCIWPRALTQAERTKAFEALYVRHHEAHSCVCQRDEIADSWIGVLEGF
LRVQDTTADGRLIMFTGVASSGWIGEGSLLKPEHRRYEVMATRPTITVHLPRTTFSWLLD
RSIPFNHFMLSHLNERLAQFIAMVKFDRLLEPTARVARGISSLFHPVLYPNTESTLRINQ
EEIGLLVGISRQRVNVALTELETAGLIQRGYGYITVMDRQALAKYP
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccgccaaggacctcaacgccttctttgaacgatgcatctggccacgcgccctg
acgcaggccgagcgaacgaaagcgttcgaagccctgtacgttcgtcatcatgaagcgcac
tcctgtgtgtgccagcgtgacgagatcgccgacagctggattggcgtgctggagggcttt
cttcgtgttcaggacaccacggcggatggccgcctgatcatgttcaccggggttgcatcc
agcgggtggatcggcgaaggatcgctcctgaaaccagagcaccgcaggtacgaggtcatg
gcgacgcgaccgaccattaccgtccatctgccaaggaccacgttctcctggctgctcgat
cgaagcattccgttcaaccacttcatgctttcgcatttgaacgagcggcttgcacaattc
atcgcgatggtgaagttcgatcgactgctcgagccgacggcgcgcgtcgcgcgtggaatc
tccagtctcttccatccggtgctctatccgaataccgagtccacactgcgaatcaaccag
gaagaaatcggattgctcgtcggcatctcgcgccagcgtgtcaacgtcgcattgaccgag
ctggaaacagcgggcctgattcagcggggttacggctacatcaccgtgatggacaggcag
gcacttgccaagtacccataa
DBGET
integrated database retrieval system
