Variovorax paradoxus B4: VAPA_1c22640
Help
Entry
VAPA_1c22640 CDS
T02835
Name
(GenBank) putative 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpaG, N-terminal subunit
KO
K05921
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:
4.1.1.68
5.3.3.-]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00350
Tyrosine metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01220
Degradation of aromatic compounds
Module
vpd_M00533
Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
VAPA_1c22640
Enzymes [BR:
vpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.68 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
VAPA_1c22640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAA_hydrolase
DUF1970
Motif
Other DBs
NCBI-ProteinID:
AGU49368
UniProt:
T1X9Y9
LinkDB
All DBs
Position
1:2404446..2405132
Genome browser
AA seq
228 aa
AA seq
DB search
MSLTNSSLAAGDAPGTVYGALLNDRATVERLAEAFNQPPYKAAPKATVLYVKPRNTFAGE
GAAVAIPSQAGAVRIDATVGAVIGRRATKVSEAQALDYVSGYRVVSDITLPHENYYRPSI
QLRCRDRFCPMSEAVPAQGFDLAVATLRVRVNGEQVHERDFTGLVRPLSRLIADVTEFMT
LEVGDVLLVGPPEGAPLARPGDRVELEVPGLGKLSHTFVSEGNAGEER
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcaccaactcatctcttgccgcgggcgatgctcccggtaccgtgtacggagcg
ctgctcaacgatcgcgccactgtcgaaagactcgccgaggcgttcaaccagccgccctac
aaggctgcgccgaaagcgaccgtcctctatgtcaagccacgcaacacgttcgcaggggag
ggcgctgcggtcgcaattccctcgcaagctggcgcagtccgcatcgatgcgaccgtaggt
gccgtcatcggccgccgggcgacgaaggtgtcagaggcgcaggcgctcgactacgtgagc
ggctatcgcgtggtcagcgacatcacgctgccgcacgagaactactaccggccgtcgatc
cagcttcgttgccgcgaccggttctgccccatgagcgaagccgtaccggcacaagggttc
gatctggctgttgccacactgcgggtgagggtcaacggagagcaggtccacgagcgcgat
ttcaccgggcttgtccgtccgctgtcccgcttgatcgcggacgtcaccgagttcatgacc
ctggaagtcggcgacgtgctgctggtcggccctccggaaggcgctcccctcgcgcgaccg
ggtgatcgcgtcgaactggaggtgcctgggctcggaaagctctcccacacattcgtatcc
gagggcaatgcaggagaagaacgatga
DBGET
integrated database retrieval system
