Variovorax paradoxus B4: VAPA_1c22950
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Entry
VAPA_1c22950 CDS
T02835
Name
(GenBank) methylmalonyl-CoA mutase
KO
K01847
methylmalonyl-CoA mutase [EC:
5.4.99.2
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00280
Valine, leucine and isoleucine degradation
vpd00630
Glyoxylate and dicarboxylate metabolism
vpd00640
Propanoate metabolism
vpd00720
Other carbon fixation pathways
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VAPA_1c22950
00640 Propanoate metabolism
VAPA_1c22950
09102 Energy metabolism
00720 Other carbon fixation pathways
VAPA_1c22950
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VAPA_1c22950
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
VAPA_1c22950
Enzymes [BR:
vpd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
VAPA_1c22950
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Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
B12-binding
HisG_C
Motif
Other DBs
NCBI-ProteinID:
AGU49398
UniProt:
T1XA21
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All DBs
Position
1:2434192..2436354
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AA seq
720 aa
AA seq
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MSSTPEPTFKPANLDDWAKAAAKSAPGGDLGALDWLTPDGITVKPLYTAADLQGLKYTDT
LPGFEPYLRGPQATMYAVRPWTIRQYAGFSTAEESNAFYRKALAAGGQGVSVAFDLATHR
GYDSDHPRVTGDVGKAGVAIDSVEDMKILFDQIPLDKVSVSMTMNGAVLPVLAGYVVAAE
EQGVSQDQLSGTIQNDILKEFMVRNTYIFPPGPSMRIIGDIIEYTAQKMPKFNSISISGY
HMQEAGANQALELAFTLADGKEYVKTALAKGLDVDGFAGRLSFFWAIGMNFYLEVAKMRA
ARLLWCRIMKEFNPKNPKSLMLRTHCQTSGWSLTEQDPYNNIVRTTIEAMAAVFGGTQSL
HTNALDEAIALPTEFSSRIARNTQLIIQEETHITNVVDPWAGSYMMEKLTQDMADAAWAI
IEEVEAMGGMTRAVDSGWAKLKIEAAAAEKQARIDSGKDVIVGVNKYKLKTEDAIDSLSI
DNVMVREQQVARLQKIRASRDAAKVQAALDALTDAAENNTGNLLALSIDAVRQRATVGEI
SDALEKSFGRHRADTQKVTGVYAAAYDSAEGWETLKTEINAFAEEQGRRPRVMISKLGQD
GHDRGAKVVATAFADLGFDVDMGPLFQTPEECARQAIENDVHAVGVSTLAAGHKTLVPAI
INELKKQGADDIIVFVGGVIPRQDYDFLYEAGVKGIYGPGTPIPASAKDVLEQIRAAVSA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacacccgaacccaccttcaagcctgccaacctcgacgactgggccaaggcc
gccgccaagtcggcgccgggtggcgacctgggcgcgctcgactggctcacgccggacggc
atcactgtgaagccgctctacaccgccgccgacctgcaggggctcaagtacaccgatacg
ctgcccggcttcgagccctacctgcgcggcccgcaggccacgatgtacgcggtgcgtccc
tggaccatccgccagtacgcgggcttctcgaccgcggaagagtcgaatgcgttctaccgc
aaggcgctggccgccggcgggcagggcgtgagcgtggccttcgaccttgccacccaccgc
ggctatgacagcgaccatccgcgcgtgacgggcgacgtcggcaaggccggcgtggccatc
gattcggtcgaggacatgaagatcctgttcgaccagatcccgctcgacaaggtgagcgtg
tccatgaccatgaacggcgccgtgctgccggtgctggcgggctacgtggtcgcggccgaa
gagcagggcgtgagccaggaccaattgagcggaaccatccagaacgacatcctcaaggag
ttcatggtccgcaacacctacatcttcccgcccgggccgagcatgcggatcatcggcgac
atcatcgagtacacggcgcagaagatgcccaagttcaactcgatctcgatcagcggctac
cacatgcaggaagccggcgccaaccaggcgctcgagctggccttcacgctggccgacggc
aaggagtacgtgaagaccgcgctggccaagggcctggacgtcgacggcttcgccgggcgc
ctctccttcttctgggccatcggcatgaacttctatctcgaagtggccaagatgcgtgcc
gcgcgcctgctgtggtgccgcatcatgaaggagttcaacccgaagaaccccaagagcctg
atgctgcgcacgcactgccagacctcgggctggtcgctcaccgagcaggacccgtacaac
aacatcgtgcgcaccaccatcgaggcgatggccgcggtgttcggcggcacgcagagcctg
cacaccaatgcgctcgacgaagccattgccctgcccaccgagttcagctcgcgcatcgcg
cgcaacacgcagctcatcatccaggaagagacgcacatcacgaacgtggtcgacccctgg
gccggcagctacatgatggagaagctcacgcaggacatggccgatgcggcctgggccatc
atcgaagaggtcgaggcgatgggcggcatgaccagggcggtcgacagcggctgggccaag
ctcaagatcgaggcggccgccgccgaaaagcaggcgcgcatcgactcgggcaaggacgtg
atcgtcggcgtcaacaagtacaagctcaagaccgaagacgcgatcgacagcctctccatc
gacaacgtgatggtgcgcgagcagcaggtggcgcggctgcaaaagatccgcgcctcgcgc
gacgccgccaaggtgcaggccgcgctcgacgcgctcaccgacgccgccgagaacaacacc
ggcaacctgctcgcactcagcatcgatgcggtgcgccagcgcgccacggtgggcgagatt
tcggacgcgctcgaaaaatcattcggccgccatcgggccgacacgcaaaaggtgaccggt
gtgtacgctgctgcctatgactcggccgaaggctgggaaacgctcaagaccgaaatcaac
gccttcgccgaggaacagggccgccgcccgcgcgtgatgatctccaagctgggccaggac
gggcacgaccgcggcgccaaggtggtggccacggccttcgccgacctgggcttcgacgtg
gacatggggccgctgttccagacgcccgaagagtgcgcgcgccaggccatcgagaacgat
gtgcacgcggtgggggtgagcaccctcgcagccggccacaagaccctggtgcccgccatc
atcaatgagctgaagaagcagggcgcggacgacatcatcgtgttcgtcggcggcgtgatc
ccgcggcaggactacgactttctctacgaggccggcgtcaagggcatctacggtccgggc
acgcccatcccggccagcgccaaggacgtgctggagcagattcgcgcggcggtttcggcc
tga
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