Variovorax paradoxus B4: VAPA_1c23260
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Entry
VAPA_1c23260 CDS
T02835
Name
(GenBank) hypothetical protein
Organism
vpd
Variovorax paradoxus B4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_6
Motif
Other DBs
NCBI-ProteinID:
AGU49428
UniProt:
T1XA52
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All DBs
Position
1:2477510..2481217
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AA seq
1235 aa
AA seq
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MSRYEWPIAPAHADEGDGDDPAARSRYNSRRRSALDLGKALRASRTPQQLPPAARRGRAP
GPFAPIMGDQFVWQHLGPATVLGGQAEGNPRVAGRINALCVHELGQRIYAASANGGVWYS
KNGGDSWVSVGGLAPTNTAGINRPAQRNACGALEVIFGTNEGDDTVFLGTGEVNSDPEGH
VGDSEGGVGILVGDKPAKPGAAADPWKPEAHHLVNNGIYRFARDPESATILVATLTGLYQ
RPAAHAGEVDWGRPTATPFATLDKPCTDILWTAANGTSPARCWVWVKDGPDFGLWVRANG
TANFKKVTVDATAGLAYVARRGALAASNPPTQVWLLNDYGGGAGTAGLFRVTNPASGTDP
VAHGVVGVPDVLRNQGFYDIAIAVDPNNANRVVLGGCFMEDVQLDGKQVQYNAAITVADV
AANPANAGILTYGQPNRYTLIGLGAHADVHALAFSNAGTSLWTGCDGGVFRSDRPDRPAG
FYPRNHGLSISESNYVACHPMAEGHLLSGLQDNGTVQRMSSGVWKMKYMGDGGGIVLNAA
NPSESFAQYVQGNWNRDPTGGTGPLTRGNLVLPSERDGAAFYSMPANIANTRSAPAAGVP
ASFSQTLIGTWRLWYSDDFGKSWVTLPTATDPLAGMTATPPVINAGQDSLGNVITACRWQ
GPDVAWVLCDQRIRRYSRAAGAPNGGGPGVWVDQNVVPTGYTPPPTPPGIPPSPEPGGKA
KKRPPPPPPAPAPAPLPISLLDSEVWTDMAPNLDAPPAPGQPPAQHGTLGALYVGTIGHK
TMPNTDTLFWFDGTDKWYPTGLHAIVPAPVLAIACRPELPLEVWAGTAVGVWQGVRTDHG
ADAPTWAWTQRVNGLPEAAVEDLAFHSFNGVTLLRAGVAARGVWELRLDDPTAADRTYLR
IHEDDLRYAVPPLVTPPNGNLRVLKKRDLVTDRSWHSSPDIRPRKAPAAMPAPSTLPWRR
DPFRGTKEQLRRFQAALRSSTSDPRIVANGIWDVYFSEVLRDHGAPVLAVPATVPPAPPM
PALSVARINAAFWNTHMTGAHATREPWGTGKPTEADLYELTPDIPEGDLGRTSYALKRGA
LKVDIVVQHRGLGARDGADVRVTLLQWIDPKPHHRAKWNDTATWFTDPVPWTGAVNEVLN
SAAGTTALAFGAGWSFVGSTDATRRQTLAGQTLDATHAGIATFDLATGTLANNRVILLVA
VIRAGADIALAPATLQELALTRPEVAVRSLHVTTT
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgagccggtacgaatggccgattgcgcccgcgcacgccgacgagggcgacggcgacgac
ccggcggcgcgcagccgctacaactcgcgccggcgcagcgcgctcgatctggggaaagca
ctgcgcgccagccgcacgccgcagcagttgcctcctgcggcgcgacgcgggcgcgcaccc
ggacccttcgccccaatcatgggcgaccagttcgtgtggcagcacctgggcccggccacc
gtgctgggcggccaggccgaaggcaacccgcgcgtggccggccgcatcaatgcgctgtgc
gtgcacgagctcggccagcgcatctatgcggcgtcggccaacggcggtgtctggtactcg
aagaacggtggcgacagctgggtctcggtgggcgggctggcgccgaccaacacggcgggc
atcaaccggcccgcgcagcgcaacgcctgcggtgcgctcgaagtgatcttcggcaccaac
gaaggcgacgacaccgtgttcctgggcaccggcgaagtgaacagcgaccccgagggccac
gtcggcgattcggaaggcggcgtgggcatcctggtgggcgacaagccggccaagcccggc
gccgcggccgacccgtggaagcccgaggcccaccacctggtcaacaacggcatctaccgc
ttcgcgcgcgaccccgagagcgccaccatcctggtggccacgctcaccggcctgtaccag
cgcccggcggcgcacgccggcgaggtcgactggggccggcccaccgccacgcccttcgcc
acgctggacaagccctgcaccgacatcctctggacggcggccaacggcacgtcgcccgcg
cgctgctgggtgtgggtgaaggatggccccgacttcggcctctgggtgcgcgccaacggc
accgccaatttcaagaaggtgacggtcgatgcgacagcgggcctggcctacgtcgcgcgg
cggggcgcgctggcggcctccaacccgccgacgcaggtgtggctgctcaacgactacggc
ggcggcgccggcaccgcgggcctgttccgcgtgaccaacccggccagcggcaccgacccg
gtggcgcacggcgtggtcggcgtgcccgacgtgctgcgcaaccagggcttctacgacatc
gccatcgcagtcgaccccaacaacgccaaccgcgtggtgctgggcggctgcttcatggaa
gacgtgcagctggacggcaagcaagtccaatacaacgctgcgatcaccgtggccgacgtc
gcggccaatcccgccaacgccggcatcctgacctatgggcagcccaaccgctacacgctc
atcggcctgggcgcgcatgccgacgtgcacgcgctggccttcagcaacgccggcacctcg
ctgtggacgggctgcgacggcggcgtgttccgcagcgaccggcccgaccgcccggccggc
ttctatccgcgcaaccacggtctgagcatcagcgagagcaactacgtggcctgccatccc
atggccgaggggcacctcctcagcggcctgcaggacaacggcacggtgcagcgcatgtcc
agcggcgtgtggaagatgaagtacatgggcgacggcggcggcatcgtcctgaacgcggcc
aacccgagcgagtccttcgcgcagtacgtgcagggcaactggaaccgcgaccccaccggc
ggcaccggcccgctgacccgcggcaacctggtgctgccttccgaacgcgacggcgccgcc
ttctattcgatgccggccaacatcgccaacacgcgcagcgcgccggcggcgggcgtgccg
gccagcttcagccagaccttgatcggcacctggcggctctggtactcggacgacttcggc
aaaagctgggtcacgctgcccaccgcgaccgacccgctggccggcatgaccgccacgccg
ccggtcatcaacgccgggcaggacagcctcggcaacgtgatcaccgcctgccgctggcag
ggccccgacgtggcctgggtgctgtgcgaccagcgcatccggcgctattcgcgcgccgcc
ggcgcgcccaacggcggcggcccgggcgtgtgggtggaccagaacgtggtgccgaccggc
tacaccccgccgcccaccccgcccggcatcccgcccagccccgagcccgggggcaaggcc
aagaagcggccgcccccgccgccacccgcgcctgcccccgcgcccctgccgatctcgctg
ctcgactcggaggtatggaccgacatggcacccaacctcgacgcgccgccggcgcccggc
cagccgcccgcgcagcacggcacgctgggcgcgctgtacgtgggcaccatcggccacaag
acgatgcccaacaccgacacgctgttctggttcgacggcaccgacaagtggtatcccacc
ggtcttcatgccatcgtgccggcgccggtgctggccatcgcctgccggccggagcttccg
ctggaggtgtgggccggcaccgcggtgggcgtgtggcagggcgtgcgcaccgaccacggc
gccgatgcgccgacctgggcctggacgcagcgcgtcaacggcctgcccgaggcggcggtg
gaagacctggccttccacagcttcaacggcgtgaccctgctgcgcgcgggcgtcgcagcg
cgcggcgtgtgggagctgcggctggatgatccgaccgcggctgaccggacctacctgcgc
atccacgaggacgatttgcgctacgccgtgccgcctctggtgacgccgcccaacggcaac
ctgcgcgtgctgaagaagcgcgacctggtcaccgaccgctcctggcacagcagccccgac
atccgcccgcgcaaggcgccagccgccatgcccgcaccgtccacgctgccctggcggcgc
gaccccttccgcggcacgaaggagcagttgcgccgcttccaggccgcgctgcgctccagc
accagcgacccgcgtatcgtcgccaacggcatctgggacgtgtacttcagcgaggtgctg
cgcgaccatggcgcgccggtgctggcggtgccggccacggtgccgcccgcgccgccgatg
ccggcgctgagcgtggcgcgcatcaacgcggccttctggaacacgcacatgaccggcgcc
catgccacgcgcgagccctggggcaccggcaagccgaccgaagccgacctgtacgagctc
acacccgacatccccgagggcgacctgggccgcacctcgtatgcgctgaagcgcggcgcc
ctcaaggtcgacatcgtggtgcagcaccgcggactcggcgcgcgcgacggcgccgacgtg
cgcgtgacgctgttgcagtggatcgaccccaagccgcaccaccgcgccaagtggaacgac
accgcgacctggttcaccgacccggtgccgtggaccggcgcggtcaacgaggtgctgaac
tccgccgccggcaccaccgcgctggctttcggcgccggctggagcttcgtcggcagcacc
gacgccacgcggcgccagacgctggccggccagacgctggacgccacgcacgccggcatc
gcgaccttcgacctggctaccggcacgctggccaacaaccgcgtgatcctgctggtggcc
gtgatccgggccggcgccgacatcgcgctcgcacccgccaccctgcaggagctggcgctg
actcgtcccgaagtcgccgtgcgttcgctgcacgtcaccaccacttga
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