KEGG   Variovorax paradoxus B4: VAPA_1c23580
Entry
VAPA_1c23580      CDS       T02835                                 
Name
(GenBank) putative ATP-dependent helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
vpd  Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpd03400]
    VAPA_1c23580
Enzymes [BR:vpd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     VAPA_1c23580
DNA repair and recombination proteins [BR:vpd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VAPA_1c23580
SSDB
Motif
Pfam: Helicase_C_2 DEAD DEAD_2 BrxC_ab
Other DBs
NCBI-ProteinID: AGU49460
LinkDB
Position
1:2518173..2520239
AA seq 688 aa
MSETLEDKVRDAFAQGGVLSRAAEQFRERSGQTEMALAVARTIEEGGVLVVEAGTGVGKT
FSYLVPALLSGERVLLSTATKTLQDQLFGRDLPRLVEALELPVRTALLKGRASYLCLHRL
DLARHDASLPERGSLRTLAKIEQWSKATRTGDLAELPGLDERSPLIPLITSTRENCLGAQ
CPQFKPCHVNLARREALAADVVVINHHLFFADLAVRETGMAELLPTVSVVVFDEAHQLNE
TGVQFLGAQLGSGQALDFARDLLGAGLQHARGLVDWQQLVAGVERAARELRLAVGKQWPG
TKLRWVGPSPEGIDAQVWQDALEALQQAFEMAAEGLDTVSEISPDFVRLYERAQQLAKRA
ARFALPCETDSVRWVDVGTQLRLVESPLDIAEAMRTRVLKIGSGTAHEDGDGEEGREDRM
APEDNGRAWVFTSATLGDEPTLRWFTEPCGLGDAQVLRVQSPFDYAAQAGLYVPRAFPKP
NDAAHSLRVAQLAARGAAELGGRTLVLTTTLRALRAIGDEMRQQFERLEADVRPEVLVQG
ELPKRVLMDRFREGADAGRAGCVLVASASFWEGFDAPGDALQLVVIDKLPFPPPNDPLVE
ARSQRLEAQGRSSFSDYSLPEAAVALKQGAGRLIRRETDCGVLAICDTRLVAMGYGRRLL
AALPPMRRLESEADFEAAIGELRNSLSA
NT seq 2067 nt   +upstreamnt  +downstreamnt
gtgagcgaaacactcgaggacaaggtgcgcgacgccttcgcgcagggcggcgtcctgtcc
cgtgccgccgagcagttccgcgagcgttcggggcagaccgagatggcgctggccgttgcc
cgcaccatcgaggagggcggcgtgctggtggtcgaggccggcaccggcgtgggcaagacc
ttttcctacctcgtgccggcattgctgagcggcgagcgcgtgctgctgtcgaccgccacc
aagaccttgcaggaccaattgttcggccgcgaccttccgcgtctggtcgaggcgctcgaa
ctgccggtgcgaacggcgctgctcaaggggcgtgcgagctatctgtgcctgcaccggctc
gacctggcgcgccacgatgcatcgctgcccgagcgcggcagcctgcgaacgctggccaag
atcgagcaatggtccaaggccacgcgaaccggcgacctggccgagctgcccgggctggac
gagcgctcgccgctcattcccctcatcacctccacgcgcgagaactgcctgggcgcgcag
tgcccgcagttcaagccctgccacgtcaacctggcgcggcgcgaggcgctggcggccgac
gtggtggtcatcaaccatcacctgttcttcgccgatctcgcggtgcgcgagaccggcatg
gcggaattgctgccgaccgtgagcgtggtcgtgttcgacgaagcccaccagctcaacgaa
accggcgtgcagttcctgggcgcgcagctcggcagcgggcaggcactcgacttcgcgcgg
gatctgctcggtgccggcttgcagcatgcgcgcggtctggtcgactggcagcagctggtg
gcgggcgtcgaacgcgccgcgcgcgagttgcgccttgcggtcggcaagcagtggcccggt
accaagctgcgctgggtggggccgtcgccggaaggcatcgatgcacaggtctggcaggac
gccctcgaagccctgcagcaggccttcgagatggccgccgaagggctggacaccgtcagc
gagatatcgcccgatttcgtgcgcctgtacgaacgggcgcagcagctcgccaagcgcgcg
gcacgcttcgcgctgccctgcgaaaccgactcggtgcgctgggtcgacgtgggcacgcag
ctgcgcctggtcgaatcgccgctcgacattgccgaggccatgcgcacgcgcgtgctcaag
atcggcagcggcactgcccatgaagacggcgatggggaagagggccgtgaagaccgcatg
gcacccgaagacaacggacgcgcctgggtcttcacctctgccacgctgggcgacgaaccc
acgctgcgctggttcaccgagccgtgcggcctgggcgatgcgcaggtgctccgggtgcag
agcccgttcgactatgccgcgcaggccgggctctatgtgccgcgtgcctttccgaagccc
aacgacgccgcccacagcctgcgggttgcgcaactggccgcgcgaggcgctgccgaactc
ggcggccggaccctggtgctgacgaccacgctgcgcgcgttgcgcgcgatcggcgacgag
atgaggcagcagttcgagcggctcgaggcggatgtgcggcccgaggtgctggtgcagggc
gaactgcccaagcgcgtgctcatggaccgtttccgcgaaggtgcggacgccgggcgcgcc
ggctgcgtgctggtggcatccgcatcgttctgggagggcttcgatgcacccggggacgca
ttgcagctggtggtgatcgacaagttgccgtttcctccgcccaacgacccgctggtcgag
gcgcgctcgcagcgcctcgaagcccaggggcgcagttcattcagcgactattcgctgccc
gaggcggccgtggcgctgaagcagggggctgggcggctgattcgccgcgaaacggactgc
ggcgtgcttgccatttgcgacacccgcctggtcgccatgggctatggccggcggctgctg
gccgcgctgccgccgatgcggcggctggagagcgaagcggacttcgaggcggcgatcggc
gagctcaggaattcgctctcggcctga

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