Variovorax paradoxus B4: VAPA_1c24020
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Entry
VAPA_1c24020 CDS
T02835
Name
(GenBank) putative tripartite tricarboxylate transporter, TctA family
KO
K07793
putative tricarboxylic transport membrane protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VAPA_1c24020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c24020
Transporters [BR:
vpd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VAPA_1c24020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TctA
Motif
Other DBs
NCBI-ProteinID:
AGU49504
UniProt:
T1XB00
LinkDB
All DBs
Position
1:2558192..2559700
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AA seq
502 aa
AA seq
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MSAALLQAFSMVFEPYTILVMVLASLYGLFVGAVPGLSATMAVALLVPVTFFMQPIPAIA
AMVTATAMAIFSGDIPGCLLRIPGTPASAAYTDEAFAMTRKGMAETALGAGLVFSAVGGL
FGTVVLIVAAPALADFALNFSSFEYFWLVLLGLTCAVFITSDRPLKGMITLLLGLLVACV
GLGNPAGFPRFTFGNAEMTGGIGMIPMMIGMFAISEVIRFAVDTLPPGEVVVEKVGSVLS
GQWALAKKYPVQILRGSVLGTAVGALPGAGADIAAWMSYAMSKKFSKEPEKFGTGHVEGI
VESGSANNSALAGAWIPALVFGIPGDSITAIVIGVLYMKNLNPGPTLFTTNPQNIYAVFM
LFIIANIIMIPLGILCIKVAKRILRVPRNVLMPLILLFCIVGAFAINNSLFDVGVMLAAG
IVAYLLEENGFPIAPAILGVVLGGMLEENFITSMIKSDGNLAGFVARPIAASLAAVVLLV
WLAPLLRKLWLRGRRTASSTAA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagcactcttgcaggctttctcgatggtcttcgagccctacaccatcctcgtg
atggtgctggcctcgctctatggcctgttcgtcggcgcggtcccggggctgtccgccacc
atggcggtggcgctgctggtgccggtcaccttcttcatgcagccgattccggccatcgcg
gccatggtgacggccaccgccatggccatcttctccggcgacatcccgggctgcctgctg
cgcattccgggcacacccgcatccgccgcctacaccgacgaggcctttgcgatgacgcgc
aagggcatggccgagacggcactgggcgcggggctcgtgttctcggcggtgggcggtctt
ttcggcacggtggtgctgatcgtggcggcgcccgcgctggccgacttcgcgctcaacttc
agttccttcgagtacttctggctcgtgctgctgggcctgacctgcgcggtgttcatcacc
tccgaccggccgctgaagggaatgatcacgctgctgctcggcctgctcgtggcgtgcgtg
ggcctcggcaacccggcgggctttccgcgcttcaccttcggcaatgccgagatgaccggc
ggcatcggcatgatcccgatgatgatcggcatgttcgccatctcggaggtgatccgcttc
gcggtcgacacgctgccgccaggcgaggtggtggtcgagaaagtggggagcgtgctctcg
ggccagtgggcgctggccaagaagtatccggtgcagatactgcgcggcagcgtgctgggc
accgcggtgggggcgctgcccggcgcgggtgccgacattgcggcgtggatgtcgtacgcc
atgagcaagaagttctcgaaggagcccgagaagttcggcacgggccatgtcgagggcatt
gtcgaatcgggttcggccaacaacagcgcgctggccggcgcgtggattccggcgctggtg
ttcggcattccgggcgactcgatcaccgccatcgtgatcggcgtgctctacatgaagaac
ctcaatccgggaccgacgctgttcaccaccaacccgcagaacatctatgcggtgttcatg
ctgttcatcattgccaacatcatcatgattccgctgggcatcctctgcatcaaggtggcc
aagcgcatcctgcgggtgccgcgcaacgtgctgatgccgctgatcctgctgttctgcatc
gtcggcgcgttcgccatcaacaactcgctgttcgacgtgggcgtgatgctcgcggccggc
atcgtggcctacctgctcgaggagaacggctttccgattgcgccggcgatcctcggcgtg
gtgctcggcggcatgctcgaggagaacttcatcacctcgatgatcaagtcggacggcaac
ctggccggcttcgtggcgcggccgattgccgcttcgctggcggccgtggtgctgctggtg
tggctcgcccccttgctcaggaagctgtggctcagggggcggcgcaccgcgtcgtctact
gcagcttga
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